Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2516 ATGGCGTCGGCTTCGCAGGGTTTCTCTCCTTTTCAAAGGTTTTGGGCGTTATTTCAGGGAGGGATGAGGCTGCCGGTTGATCCCTCGGCTCATACTATCAAGTCCCATGGAGCCGCACTTGCAAGAAATCACGTTCGTGATTGGCTTATTTTGTTGCTTCTTATAGTGATAGAGGTTGTCCTTTTTGTCATCAAACCATTTTATCGCTTTGTGGGAAGGGATATGATGGAAGACCTTAAATATCCTATGAAAGAAAACACGGTGCCAGTTTGGGCTGTTCCTTTATATGCGGTTCTGTTGCCAATGGCTGTTTTCCTTCTATTTTATATGCGCAGGAGAGATGTATACGATTTACATCACAGTGTTTTAGGCTTGTTATTTGCAGCTCTGATCACTGGGGTCTTAACCGATGCTATAAAAAATGCAGTTGGCCGGCCTCGGCCAGACTTCTTTTGGCGTTGCTTTCCCGATGGAGTGGAGAATTATGATAAATGGGGAGATGTGGTATGTCATGGCAAGGAGAGCGATATAAAAGAAGGACACAAAAGTTTCCCAAGCGGTCATACATCATGGTCCTTTGCAGGTCTAGGTTTTCTTTCTCTGTACCTGTCGGGAAAGATTAAAGCTTTTGATCAAAAAGGGCACATAGCAAAATTGTGCATTGTTTTTCTTCCTCTTCTTACTGCTTGCATGGTTGGAATCTCACGAGTGGATGACTATTGGCATCATTGGCAAGATGTGTTTGCAGGAGGACTTCTGGGGTTAGTTGTGGCAACCTTTTGCTATATGCAGTTCTTCCCTGCTCCCTATAGTAATGAAGGATGGGGTCCATATGCATATTTCCGAGCAATGGAGGAATCACGAGGCAACAATGGAAACACGGACAGGGAGTCGCCGGTTGTGCAGGCGATGGAGGAAGGTGTTACGAATCAAGAACCAAGGAGAAATGGTGATACCTTTACACCTTACCCTTTTCGTAGCCCAACCTTGGAAGCCATGGAAATGGAACACAAGTAA 1017 0.4494 MASASQGFSPFQRFWALFQGGMRLPVDPSAHTIKSHGAALARNHVRDWLILLLLIVIEVVLFVIKPFYRFVGRDMMEDLKYPMKENTVPVWAVPLYAVLLPMAVFLLFYMRRRDVYDLHHSVLGLLFAALITGVLTDAIKNAVGRPRPDFFWRCFPDGVENYDKWGDVVCHGKESDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDQKGHIAKLCIVFLPLLTACMVGISRVDDYWHHWQDVFAGGLLGLVVATFCYMQFFPAPYSNEGWGPYAYFRAMEESRGNNGNTDRESPVVQAMEEGVTNQEPRRNGDTFTPYPFRSPTLEAMEMEHK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2516 338 MobiDBLite consensus disorder prediction 306 326 - -
Vra8g2516 338 SMART acid_phosph_2 122 262 IPR000326 -
Vra8g2516 338 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 24 326 - -
Vra8g2516 338 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 42 274 - -
Vra8g2516 338 Pfam PAP2 superfamily 122 266 IPR000326 -
Vra8g2516 338 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 44 271 IPR036938 -
Vra8g2516 338 CDD PAP2_containing_1_like 79 265 - -
Vra8g2516 338 PANTHER LIPID PHOSPHATE PHOSPHATASE 24 326 IPR043216 GO:0006644
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2516 Vra-Chr8 43100065 43108080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2516 29 321 Lipid Metabolism Gene Families AT3G02600 65.574 2.65e-153 431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2516 8 43100065 43108080 Vra8g2516 8 43100065 43108080 ECH
Vra8g2516 8 43100065 43108080 Vra4g1330 4 20056958 20061056 ECH