Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2508 ATGGAGAAGGTTTGTGAGTTCTGCACGGCCCTGAGGCCACTTGTTTACTGTAAAGCTGATTCGGCATATCTTTGTCTATCCTGTGATGCGAAGGTGCATTTGGCAAATGCTTTGTCCGGCCGGCACCTCCGGAACCTTGTGTGTAACTCATGTGGACATCATGCTGCTTATGTTGTATGTTTGAACCACAAAATGTTAATCTGTCGAGACTGTGATAAAAAATTGCACAATGTTTCTTTATCACACCAGAAACGAGCTATCAGAAGTTTCATAGAATTGAATGTAGCACAAGTCTCAGGAAAGCCTGACATTCAAACTGGGGTCCCTTCATTGCTAGCTGGGGCCAAACTTGATGAGGGATCGACCAGTCAACAAGGTCAGATATTGCACAATCATCAAGAGCGTCAAACTATTGTGCAGCAGATTATTGATCTAAAATGGCTCCAACAAAATGAGGAGATTGATTATTCTGCGAAGATCAGTAGGCTAAAAGAAAAAAAATCATCACCTTCATTATATAACACTCTTAAGAAATTGGACGAAAAAATCAATGGTCAAGCACAAAATTCCCAGGATTTGGCTACTAATGTTCTGGAAAAAGACCGTCCTATCGTGGAGCCGAGCACAGAAACTTTGCCTTCTACTTTTTCTCAACTTGATAATTTATCTTCATCTTCAATTATCGATCTTCCCTTGCATGGAGAATTGTTCTGGACCTGCAAAAGTCCTCTTCGAAGTAATCAGCTATGGTCCCAAAATATTCAAGACCTCGGTATATGTGAAGAACTTGTTCGTCTAGATGATTTTAACATCCCTGATGTTGACTTAACTTTCCAGAACTTTGATGAATTATTTGGAGGAGATCAGGATCCAATTAGAATATTGTTTGATGATCAAGATGTCTCTTGCTCTTCTTTAGAGAAGGATAAGTCAGTCGGCAAGTCAGATATTGACAATCTAAGTGCAATGGAGGATTCTTCGGCTTCTGCATCCATTAATCTCTTCCAATCTGATCATGAGAACAAGGATATGAACCCTCTCGTCCAGTACTGTCCAAAAAGCATTGATCCTACTCATGCAACTCAACCATTTGATTCAACTATACCCTTATCTGTTTTGGGAATCAGTCTGGAAAGCAGTTTCACACATGAGGACAGTATCCTTTCTCCCTACAGTGAAGGGAAGGCTTATTCAGGCATGAGAAGCAATTTCGACTTCTATCCAGGAAACCTGGAGCTAATGTAA 1245 0.4048 MEKVCEFCTALRPLVYCKADSAYLCLSCDAKVHLANALSGRHLRNLVCNSCGHHAAYVVCLNHKMLICRDCDKKLHNVSLSHQKRAIRSFIELNVAQVSGKPDIQTGVPSLLAGAKLDEGSTSQQGQILHNHQERQTIVQQIIDLKWLQQNEEIDYSAKISRLKEKKSSPSLYNTLKKLDEKINGQAQNSQDLATNVLEKDRPIVEPSTETLPSTFSQLDNLSSSSIIDLPLHGELFWTCKSPLRSNQLWSQNIQDLGICEELVRLDDFNIPDVDLTFQNFDELFGGDQDPIRILFDDQDVSCSSLEKDKSVGKSDIDNLSAMEDSSASASINLFQSDHENKDMNPLVQYCPKSIDPTHATQPFDSTIPLSVLGISLESSFTHEDSILSPYSEGKAYSGMRSNFDFYPGNLELM* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2508 414 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Vra8g2508 414 CDD Bbox1_BBX-like 4 44 - -
Vra8g2508 414 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 100 385 - -
Vra8g2508 414 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 91 - -
Vra8g2508 414 SMART bboxneu5 1 47 IPR000315 GO:0008270
Vra8g2508 414 SMART bboxneu5 48 87 IPR000315 GO:0008270
Vra8g2508 414 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 91 - -
Vra8g2508 414 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 100 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2508 Vra-Chr8 43034388 43041249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2508 1 292 C2C2-CO-like Transcription Factor Family AT1G68190 37.582 9.04e-57 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2508 8 43034388 43041249 Vra8g2508 8 43034388 43041249 ECH