Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2505 ATGCATCACCAATTCCATGATTTTCTCACTGAAAACAGCATCATGTCGCAGAACCAGAACAATGTCCCACAGCAACCTCTACCCTCCAGTGGACATGTGACAGCGAGAGTGGTAAATTTGAATTCCGATAGGCTCTGCATAAGCCCCAAGCGAGATCACAAGTCTGAAAACTATGAGGACCTTCAAATGGAGTTCAATCCTCACGTCTTCAGCTCACTGGAGCAGTATTTGCCTCCTCACGTCCTCAACCTCTCACGTGAGGTTAAGGTTCGGTATATGAGGAACATTCTGCTTCGCTATTTCCCCGAGAATGACCGCAATCGGATTCAAAAGCTGAGGGAGTACAGGCTGAAGATCATATTAAATTATCCACCACTACATAGGGAGATATATACTATGGATGCTGAGAACTTTTTCACACCATCATTTCTCAGAGCAATTAAAGAAAACACTGAAGCAAGTTTTAGAAGTATAATGGCTGAACCTAGTACAGGAATTTATACATTTGAAATGCTTCAACCCCAATTTTGTAAAAAACTGATGTCTGAGGTGGATAGTTTTGAAAGATGGGTTCGTGGTACCAAACTCAGAATCATGCGCCCTAGTGCTATGAATAAACATGGTGTTGTTCTTGAAGATTTTGGGCTGGAAACCATGCTTGACAGATTTATGAGTGATATCATACATCCCATATCACGAGTTTTCTACAGTGAATTTGGTGGATCCTCACTGGACTCTCACCACGGTTTTGTTGTTGAATATGGAATCAGTAAAGACGTTGAACTTGGTTTACATGTGGATGATGCAGAAGTCTCTTTGAATGTTTGCTTGGGAAAAGAATTTTCTGGCGGAGAAGTGTTCTTCCAGGGTGTTCGATGTGAAGAACATGTACTATCAATAGCCCAGCCAGGAGAGATCTTCAATTATTCCCATGTTCCAGGACAGGCAATTCTTCATCCTGGCCGTCAACGGCATGGCGCAAGACCTACAACATCTGGGAACAGGATGAATTTAATCATCTGGTGTAGAAGTTCGACTTTCAGAGAGTTGAAGAAATATCAGAGAGATTTTACTAGCTGGTGTGGAGAATGCAAACGCAAGAAAAAAGAGAGAGCGCGGTTATCGCTTATGGTCTCCCAACAGGAATTACTGAAGAGGGAAATATAA 1167 0.4225 MHHQFHDFLTENSIMSQNQNNVPQQPLPSSGHVTARVVNLNSDRLCISPKRDHKSENYEDLQMEFNPHVFSSLEQYLPPHVLNLSREVKVRYMRNILLRYFPENDRNRIQKLREYRLKIILNYPPLHREIYTMDAENFFTPSFLRAIKENTEASFRSIMAEPSTGIYTFEMLQPQFCKKLMSEVDSFERWVRGTKLRIMRPSAMNKHGVVLEDFGLETMLDRFMSDIIHPISRVFYSEFGGSSLDSHHGFVVEYGISKDVELGLHVDDAEVSLNVCLGKEFSGGEVFFQGVRCEEHVLSIAQPGEIFNYSHVPGQAILHPGRQRHGARPTTSGNRMNLIIWCRSSTFRELKKYQRDFTSWCGECKRKKKERARLSLMVSQQELLKREI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2505 388 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 28 387 - -
Vra8g2505 388 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 28 387 - -
Vra8g2505 388 Gene3D q2cbj1_9rhob like domain 160 344 - -
Vra8g2505 388 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 245 344 IPR005123 -
Vra8g2505 388 SMART p4hc 164 343 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2505 Vra-Chr8 42986828 42992557 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2505 8 42986828 42992557 Vra8g2505 8 42986828 42992557 ECH