Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2503 ATGGCCATGGCTTCTGCAAAGCTCAATACTTTGTCTTCACAGTGGATCGCCCACAGCACCTTTTCTCCCCGCCGGGGATCTTCTCCTCGCCGGGTCTCTCTCCCGATCCGCGCCTCTTCTTATCAACACGAACTCGTCCAAACCGCCAAATCTATTGCAACTCCTGGGCGTGGAATTCTTGCAATTGATGAATCAAATGCAACATGCGGGAAGCGTTTAGCATCCATTGGTTTGGACAATACTGAGGTGAATCGCCAGGCTTACAGGCAACTTCTGCTTACCACACCTGGCCTTGGAGAGTATATTTCTGGTGCCATTCTTTTTGAAGAAACCCTTTACCAGTCAACCACTGATGGAAAGAAATTTGTGGATTGCCTTCGTGATCAGAACATTGTTCCTGGCATCAAAGTTGATAAGGGTCTGGTCCCCCTGCCGGGTTCGAACAATGAATCATGGTGCCAAGGGTTGGATGGATTGGCTTCTAGGTCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCCAAGTGGAGGACAGTTGTTAGCATTCCATGTGGTCCTTCTGCATTAGCTGTTAAGGAAGCGGCATGGGGACTTGCACGTTATGCCGCTATCTCTCAGGACAATGGCCTTGTGCCAATTGTGGAGCCTGAAATTCTTTTGGATGGAGACCACTCAATTGAAAGGACGTTGGAAGTGGCTGAGAAAGTGTGGTCAGAAGTCTTCTTCTACTTGGCTGAAAACAATGTCATGTTTGAGGGAATTTTGCTCAAACCTAGCATGGTTACACCTGGGGCTGAACATAAGGAAAAGGCTTCTCCGGAAACCATTGCCAAATATACTCTAACCTTGCTTAGAAGAAGAGTTCCTCCAGCAGTACCCGGAATCATGTTTTTGTCGGGTGGGCAATCTGAAGTGGAAGCAACACTTAATCTAAATGCAATGAACCAAAGCCCCAACCCATGGCATGTTTCTTTCTCGTATGCTCGAGCTCTTCAGAACACCGTGCTAAAAACGTGGAAAGGACATCCTGAGAATGTGGAAGCTGCTCAAAAGTCTCTTTTGGTGCGCGCAAAAGCAAACTCCTTGGCTCAACTTGGAAGATATTCTGCGGAGGGTGAGAGTGAAGAGGCAAAGAAGGGAATGTTTGTCAAGGGCTATGTCTACTAA 1167 0.4747 MAMASAKLNTLSSQWIAHSTFSPRRGSSPRRVSLPIRASSYQHELVQTAKSIATPGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTTDGKKFVDCLRDQNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHSIERTLEVAEKVWSEVFFYLAENNVMFEGILLKPSMVTPGAEHKEKASPETIAKYTLTLLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWKGHPENVEAAQKSLLVRAKANSLAQLGRYSAEGESEEAKKGMFVKGYVY* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2503 388 SUPERFAMILY Aldolase 35 388 - -
Vra8g2503 388 Gene3D Aldolase class I 30 387 IPR013785 -
Vra8g2503 388 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 21 388 - -
Vra8g2503 388 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 249 259 IPR029768 -
Vra8g2503 388 Pfam Fructose-bisphosphate aldolase class-I 44 388 IPR000741 GO:0004332|GO:0006096
Vra8g2503 388 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 21 388 IPR000741 GO:0004332|GO:0006096
Vra8g2503 388 CDD FBP_aldolase_I_a 44 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2503 Vra-Chr8 42972833 42976510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2503 39 388 Miscellaneous Gene Families AT3G52930 55.085 2.17e-132 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2503 8 42972833 42976510 Vra8g2503 8 42972833 42976510 ECH