Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2499 ATGGAGCCAGAGAATCACAAAACGAAGGCAGTGAACGTGCTTCGAAGCAGAATCTGCGACCCCAAATTCATCTTCAACAACGATTATCCAGACAGCAACTACAGCAAACTGAAATTCATGATATCGAGTTCGGTGACGGAAGCGTGCAACAATTCTATTCTGCTACTCGGTCCGCGCGGCTCCGGAAAGAACGCGGTTTTGGAAGTTGTCATTCAAGATTTGCTGCAAGAGTATCCAGACTCGATTTCAGTGATACGGTTGAATGGCCTTTTACATAGTGACGACGTCTCTGCATTCAAGGAAATAGCTAGGCAGTTGTGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAGTTTATGGTTGCCATTCTAAGGGAATGTGGATTAGCACATAAAACAGTGATATTTGTTCTGGAAGAGTTTGACTTGTTTGCTCAGGGTAAACAGCGGTTACTTTATAGTTTGTTAGATGCAATGCAATCAATTACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGTTTGGATGCAGATCAACTGTTGGAGAAAAGAGTACGATCTCGGTTTTCCCATAGAAAGCTGTTGTTCTTACCACCTTCAATGGAAGATTCACAGAAGTTACTAATGCACATACTGAAATTACCAATCGATTCAAGCTTTCCGCATGATTATGCTACTGAGTTTAACACGAAGGTCCAAAATATTATAGAAGATAGAAAGTTCAAAGAAACCCTACAAAAATATTTAAATGTTGATTCCTCTGTCAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATGGATTTGCAGACTGGGTTCTTGTCTCAGGAGAGCTTTGAAATTGCATTTTCAAGCATCCAAAGACAACCGAAACTAGAATGTTTAAGAAATTGCTCCAATTTAGAACTTCATATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGAAAAGTTTATGCAATTTCAATTCTGTAATGAAAGAGTATAAAAGTATGCATGATTCCTTCCGAACTTCTGAATATTATTCGAGAAATGTCTGCTTACGGGCATTTGAACACCTTCTACATCTTGAGATGATATATTTCACAGACAATAGAGGACAGAATTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTGCTGAACTACATCAGGGACTGAGAGCGTATAATTCATGCCCTGCTTACCTTATAAAGTTAATGGATCGTGAAGGCTGA 1254 0.3931 MEPENHKTKAVNVLRSRICDPKFIFNNDYPDSNYSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLEVVIQDLLQEYPDSISVIRLNGLLHSDDVSAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAILRECGLAHKTVIFVLEEFDLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSQKLLMHILKLPIDSSFPHDYATEFNTKVQNIIEDRKFKETLQKYLNVDSSVKHLLRFLFCAVSHMDLQTGFLSQESFEIAFSSIQRQPKLECLRNCSNLELHILVCMKRLEVKEKSLCNFNSVMKEYKSMHDSFRTSEYYSRNVCLRAFEHLLHLEMIYFTDNRGQNLSVEFRPVKLLISSAELHQGLRAYNSCPAYLIKLMDREG* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2499 417 Pfam AAA ATPase domain 35 168 IPR041664 -
Vra8g2499 417 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 214 397 IPR032705 -
Vra8g2499 417 Gene3D - 31 205 IPR027417 -
Vra8g2499 417 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 8 416 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Vra8g2499 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 254 IPR027417 -
Vra8g2499 417 CDD AAA 51 199 - -
Vra8g2499 417 PIRSF ORC4 3 417 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2499 1 414 Core DNA Replication Machinery Family AT2G01120 63.357 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2499 8 42920679 42925675 Vra8g2499 8 42920679 42925675 ECH