Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2498 ATGTTACGGCTCACCACCATGGGATTGGTAACCACCACTGTTCCCGCGAACGTCGTTCCTCAATTCGGTTCAGTCCGATCGTCTATTCGGGTCGGAAACCCATCCGGGTTGAATTTCCCTCTTTCACTATCACAGAAGAGGAATAGGAGCCATGTTTGCTTGGCTGTGGATGACGACCTCAGACAGGAGCAGCAGGACTCGAGTACAACCGGTATTGGGTTGGGTTCCGCCCTTGAAGAAAGGCCCGAAAACACAGATCTTTTTGAGAGTACATCAGAAGAAATGCAGGGAAATTTTGAACAAGATGGTGAACGAAGTGCTATCTATGATTTTCTTTATCCTAATAAAGATCTTCTTCCTGATGATAAAGAAATGAGTGTATTTGATCATCTTGAAGAGCTGCGGCAGAGAATCTTTGTATCAGTTTTAGCTGTTGGAGGTAGCATTTTGGGATGCTTTACATTTTCAAAAGAATTGATAATAATTCTTGAAGCTCCTGTTAAATCACAGGGTGTAAGATTTCTTCAGCTGGCTCCTGGTGAATTTTTCTTTACAACTTTAAAGGTGTCTGGGTACTGTGGCCTTCTTTTGGGAAGCCCCGTCATCCTCTATGAAATCATAGCCTTTATACTTCCAGGACTTACAAAAGCCGAAAGAAGATTTCTAGGGCCAATTGTTTTAGGCTCATCAGTTCTTTTCTATGCCGGAATAACTTTCTCCTACTTAGTTCTGACACCTGCCGCTTTAAATTTCTTTGTTACCTACGCTGAAGGTGCTGTTGAATCAATTTGGTCCATTGATCAGTACTTTGAATTTGTTCTTGTGCTTATGTTCAGTACAGGCTTATCTTTCCAGGTACCTGTCATACAATTTCTACTGGGACAACTTGGACTGGTATCCGGAGACCAGATGCTATCAATTTGGAGGTATGTTGTGGTTGGTGCAGTAGTGGCAGCTGCTATAGTTACGCCATCTACCGATCCTCTCACTCAAGTTCTTCTGGCAGCACCTTTATTGGGTCTTTACCTTGGTGGGGCATGGATGGTCAAGCTGACTGGACGATGA 1065 0.4347 MLRLTTMGLVTTTVPANVVPQFGSVRSSIRVGNPSGLNFPLSLSQKRNRSHVCLAVDDDLRQEQQDSSTTGIGLGSALEERPENTDLFESTSEEMQGNFEQDGERSAIYDFLYPNKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGGSILGCFTFSKELIIILEAPVKSQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFILPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVTYAEGAVESIWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLTGR* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2498 354 PRINTS Bacterial Sec-independent translocation TatC protein family signature 126 153 IPR002033 GO:0016021
Vra8g2498 354 PRINTS Bacterial Sec-independent translocation TatC protein family signature 200 218 IPR002033 GO:0016021
Vra8g2498 354 PRINTS Bacterial Sec-independent translocation TatC protein family signature 218 244 IPR002033 GO:0016021
Vra8g2498 354 PRINTS Bacterial Sec-independent translocation TatC protein family signature 269 297 IPR002033 GO:0016021
Vra8g2498 354 Hamap Sec-independent protein translocase protein TatC [tatC]. 122 354 IPR002033 GO:0016021
Vra8g2498 354 TIGRFAM tatC: twin arginine-targeting protein translocase TatC 128 342 IPR002033 GO:0016021
Vra8g2498 354 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 49 354 IPR002033 GO:0016021
Vra8g2498 354 PANTHER BNAA06G35150D PROTEIN 49 354 - -
Vra8g2498 354 Pfam Sec-independent protein translocase protein (TatC) 129 337 IPR002033 GO:0016021
Vra8g2498 354 ProSitePatterns TatC family signature. 269 288 IPR019820 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2498 8 42913701 42917988 Vra8g2498 8 42913701 42917988 ECH