Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2496 ATGGAAAAGGGTCTGTTAGAGAAGGAGAGAGAGAGCGATTCAGGCATAATAAGATGGAGTATGTTTGTTGAAGAGGTGAAAAGGGTCGGTTATTTGGCAGGTCCTATGGTTACCGTGACTTTGTCACAGTATTTTCTACAAATGATATCATTGATGATGGTTGGTCACTTGGGTAAGCTTGCTCTCTCCAGCACAGCCATTGCCATCTCTATCTGTGCTGTATCTGGCTTCAGTGTCATCTTTGGAATGTCATGTGCACTGGAAACTCAATGTGGACAAGCATATGGAGCACAGCAATACAGAAAATTTGGTGTTCAAATTTACACTGCAATTGTCTCGCTTACTTTATCTTGTCTTCCTCTGAGTCTTTTGTGGGTGTACTTGGGGAAGCTGCTCATTATACTTGGCCAAGACCCTTTGATTTCACAAGAAGCTGGAAAATTTGCTTTGTGCATGATCCCTGCTCTCTTTGCTTATGCAGCACTTCAGACTTTGGTTCGATTCTTCTTGATGCAAAGCCTGATCAGTCCCCTTTTCATAAGTTCCTCCATTACACTTTTCTTCCATGTGGCTTTCAGTTGGTTAATGGTTTTTAAATCTGGACTCGGTAACTTAGGAGCAGCACTTTCTATCAGCACTTCATACTGGCTGAATGTGATTTTACTTGGATTATATATGAAATTCTCTACTCAATGTGAAAAGACTCGAGTCCCAATTTCAATGGAACTATTCGATGGGATTGGAGAATTCATCCGTTATGCCATTCCTTCGGCTGGAATGATATGCCTTGAATGGTGGTCATTTGAGCTAGTAATCTTGCTTTCTGGTCTTCTACCAAATCCAGAACTAGAAACTTCAGTCTTATCCATATGTTTAAACATCACCACAGCAATCTACACTATCCCAGAATCAATTGGCTCAGCTGCAAGCACTAGAATTTCAAATGCATTAGGAGCTGGAAGTCCACAATCCGCACGAGTGTGTGTTTATGCTGCCATGGCTCTTGCAACTTCCGAGGCCATTCTGGTGAGCTCAATCATTTTTTCTTGCAGGCAGATTTTGGGTTATGTATTTAGCAATGAACAGGACGTGGCGGATTATGTCACAAATATGGCTTCTCTCTTGAGTCTTTCTATTATACTGGATTCCTTGCATGCTACCCTATCAGGTATTGCTAGAGGATGTGGATGGCAGCACTTAGGAGCATATGTAAACCTTGGAGCCTATTATGTTTTTGGAATTCCAACTGCTGCTATATTGAGCTTCTGGTTTCAATTAGGAGGAAAAGGGTTGTGGATAGGAATAATCACTGGCGCATTCTGTCAAACAGTTATGTTATCTCTCATAACAACATGTACAAACTGGGAAGAACAGGCAATTAAAGCAAGGGAAATGATATTTCAGGGAAGTTTTTCTGTAGAAGATGTGTTGGTTTAA 1437 0.4113 MEKGLLEKERESDSGIIRWSMFVEEVKRVGYLAGPMVTVTLSQYFLQMISLMMVGHLGKLALSSTAIAISICAVSGFSVIFGMSCALETQCGQAYGAQQYRKFGVQIYTAIVSLTLSCLPLSLLWVYLGKLLIILGQDPLISQEAGKFALCMIPALFAYAALQTLVRFFLMQSLISPLFISSSITLFFHVAFSWLMVFKSGLGNLGAALSISTSYWLNVILLGLYMKFSTQCEKTRVPISMELFDGIGEFIRYAIPSAGMICLEWWSFELVILLSGLLPNPELETSVLSICLNITTAIYTIPESIGSAASTRISNALGAGSPQSARVCVYAAMALATSEAILVSSIIFSCRQILGYVFSNEQDVADYVTNMASLLSLSIILDSLHATLSGIARGCGWQHLGAYVNLGAYYVFGIPTAAILSFWFQLGGKGLWIGIITGAFCQTVMLSLITTCTNWEEQAIKAREMIFQGSFSVEDVLV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2496 478 PANTHER MULTIDRUG RESISTANCE PROTEIN 6 463 - -
Vra8g2496 478 CDD MATE_eukaryotic 25 461 IPR045069 GO:0042910|GO:1990961
Vra8g2496 478 Pfam MatE 35 195 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra8g2496 478 Pfam MatE 256 418 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra8g2496 478 PANTHER PROTEIN DETOXIFICATION 6 463 - -
Vra8g2496 478 TIGRFAM matE: MATE efflux family protein 35 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2496 Vra-Chr8 42904065 42906775 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2496 8 42904065 42906775 Vra8g2496 8 42904065 42906775 ECH
Vra8g2496 8 42904065 42906775 Vra1g0656 1 7722994 7727011 ECH