Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2494 ATGGAGGAAAGTCTGGTACAGAAGCATGAAGAAGAAAGTGAAGAAAAAAGAGTGAGATGGAGTGGTTTCAGTGAAGAAATGAGAAGGATAAGTGTAATAGCAGGGCCTATGGTGGCTGTGGTTTCTTCCCAATATTTGCTGCAAATAGTGGCAACCATGATAGTTGGTCATTTGGGTGAACTCTATCTCTCTAGCGCCGCCTTAGCCATTTCCTTAGCAGGGGTGTCTGGTTTCAGTCTTCTTATGGGAATGGCTAGTGGACTAGAGACAATTTGCGGACAGGCTTATGGAGCTCAGCAATATCAAAAAATTGGACTGCAAACATACACTGCCATTTTTTCTCTCATATTGGTTTGTATTCCCCTGTCTGTCCTTTGGCTCAACATGGAAAACATACTAGTTTTCATGGGCCAGGACCCTCTAATTTCACATGAATCAGGGAAGTTCACACTTTGGCTTCTACCAGCACTTTTTGCATTTGCAATTCTACAGCCATTAGTTCGATATTACCAAATCCAAAGTATGATTCTTCCCATGCTTGCAACTTCTTTTGTCACACTCACTATTCATATACCTCTTTGTTGGGCCCTGGTGTTCAAAACAAGGCTGAATAATGTTGGTGGAGCATTGGCAGTCAGCATTTCAATGTGGTCAAACGTGATTATGCTTGGATTATACATGAGATACTCCTCTGCTTGTGCAAAAACCCGTGCACCCATTTCTTTGGATCTCTTTAAAGGAATGTGGGAGTTCTTTCGGTTTGCCATCCCTTCGGCAGTAATGGTTTGCCTTGAATGGTGGTCGTATGAGCTGCTTATATTGCTGTCAGGGCTGTTACCAAATCCAGCACTTGAGACTTCAGTTCTATCAGTTTGTCTAAACACTATTTCAACTCTTTATACAATACCCTTTGGAATTGGTGCTGCAGCAAGCACAAGGGTTGCAAATGAATTAGGAGCTGGGAAACCACATGCTGCTCGTGTTGCTGTGTTAGCTGCAATGTCTCTTGCAGTCATTGAGACAAGTGTAGTAAGCGCAACACTCTTTGCCTGCCGCCATTTTTTTGGTTATGTCTTCAGTAATGAGAAGGAAGTTATTGATTATGTCACTGTCATGGCCCCTCTCGTATGTATATCTGTTATACTAGACAGCTTACAAGGTGTTCAAACAGGAATTGCAAGAGGTTGTGGATGGCAACATTTAGGAGTTTATGTAAATCTTGGGGCTTTCTACCTTTGTGGGATTCCAGTGGCTGTCATATTGGCATTTGTGGTGCGAGTGGGAGGAAAAGGACTCTGGATTGGTATACAATGTGGTGCTCTTGTTCAAACTATTCTACTTTCTGTCATAACCAGTAACATAAATTGGGAAAAGCAGGCCATCAAGGCAAGAAAGAGGTTATTCGATGATGAATTGGTATGA 1422 0.4233 MEESLVQKHEEESEEKRVRWSGFSEEMRRISVIAGPMVAVVSSQYLLQIVATMIVGHLGELYLSSAALAISLAGVSGFSLLMGMASGLETICGQAYGAQQYQKIGLQTYTAIFSLILVCIPLSVLWLNMENILVFMGQDPLISHESGKFTLWLLPALFAFAILQPLVRYYQIQSMILPMLATSFVTLTIHIPLCWALVFKTRLNNVGGALAVSISMWSNVIMLGLYMRYSSACAKTRAPISLDLFKGMWEFFRFAIPSAVMVCLEWWSYELLILLSGLLPNPALETSVLSVCLNTISTLYTIPFGIGAAASTRVANELGAGKPHAARVAVLAAMSLAVIETSVVSATLFACRHFFGYVFSNEKEVIDYVTVMAPLVCISVILDSLQGVQTGIARGCGWQHLGVYVNLGAFYLCGIPVAVILAFVVRVGGKGLWIGIQCGALVQTILLSVITSNINWEKQAIKARKRLFDDELV* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2494 473 TIGRFAM matE: MATE efflux family protein 36 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra8g2494 473 CDD MATE_eukaryotic 26 462 IPR045069 GO:0042910|GO:1990961
Vra8g2494 473 Pfam MatE 36 195 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra8g2494 473 Pfam MatE 257 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra8g2494 473 PANTHER MULTIDRUG RESISTANCE PROTEIN 8 464 - -
Vra8g2494 473 PANTHER PROTEIN DETOXIFICATION 8 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2494 Vra-Chr8 42889284 42894129 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2494 8 42889284 42894129 Vra8g2494 8 42889284 42894129 ECH
Vra8g2494 8 42889284 42894129 Vra1g0657 1 7746208 7750870 ECH