Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2487 ATGAGCAATCCCAAGGAAGAAGAACCGTTTGCCAGAGCTGCAAGAGCAGCAGAAGATCTTTACCATCTTCGAGACACTTATTTTCCACCCAACCCCGATGACAGAATCTCAAAGTTGCAAAACGAATTCGATCTCGCTCTTAATCTCCTCGATTCCATTCCCCCAGAACAAAGAAAATCACCTACACAACGTGCAACATTTGAATATCTTAGGGGGAAGATGTTGGATGTATTTCCTGACTATAGGAAAGAAGCTGAGGATCATCTATCAAAAGCTGTCAAGTTAAACCCATCTCTTGCAGATGCTTGGCTATGTTTAGGAAATTGCATTTGGAAAAAAGGAGATTTAACTGCTGCAAAGAACTGCCTCAGTCTTGCATTAGACAAGGGTCCTAACAAAAAGATTCTTTGTCAACTATCGATGCTTAAAAGAAAAATGTCTCAAGGTGTGGAGAATCAAGCAGAACTGGTTGAGGAAAGCATTCAACATGCCAAGGAAGCAATCACTTTGGATGTCAAGGATGGGAACTCATGGTATAATCTTGGAAATGCTTGCCTTACAAGTTTTTTTGTCACTGGAGCTTGGGATCATACCAAACTTTTACATTCTTTAAAAGCATATCAAAATGCTGAGAAAGATGAAAGAATGAAGTCCAATCCAGATTTATATTTTAATAGTGCTACAGTTAACAAATATCTTGAGAACTACCAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTAAAGGATCCAGGTCTCAATGCTGCAGAGGAGGTTCAGAAGATAGTCAGTTTACTTGACAAGGTGGACAATCTTTTGAAGGGGCATGTAAGAGCTAAGCGAATGACATCTTTGGCTTCGTCATTGGTTGCTGTTGATTTGAAATCGCCATACAGAAGAGTTACCATAGACCTTTTATCAGAGGGTCCAAATAGAGCTCTAGCAGTGGAGGCGAAAGTTTTTTTCTTTATTAGGACTGAAAGTGTTGCTCCCCTATACTATTTGCTTTGTGATTCAAATCATTCCTGCTTTGTTGTCTCGATTTATGGTGTACGTACTGATGTGATTAAAGAAGGAGATCAACTAACAATGCTTGATCCTTATTTTCGTGATGTTGATTTGTCGTGGAATGAGAAGCATTACCAGTTCAAGTCTATACGCATGGATTTCTACGAACAAGTACTTGTAAATGGAAAAGCTTTGACTCCTCAACAAGCTGCTCATTCGTCAATATATGCTCAACATAAACCCTGA 1254 0.3971 MSNPKEEEPFARAARAAEDLYHLRDTYFPPNPDDRISKLQNEFDLALNLLDSIPPEQRKSPTQRATFEYLRGKMLDVFPDYRKEAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLTAAKNCLSLALDKGPNKKILCQLSMLKRKMSQGVENQAELVEESIQHAKEAITLDVKDGNSWYNLGNACLTSFFVTGAWDHTKLLHSLKAYQNAEKDERMKSNPDLYFNSATVNKYLENYQRALSGFEAAALKDPGLNAAEEVQKIVSLLDKVDNLLKGHVRAKRMTSLASSLVAVDLKSPYRRVTIDLLSEGPNRALAVEAKVFFFIRTESVAPLYYLLCDSNHSCFVVSIYGVRTDVIKEGDQLTMLDPYFRDVDLSWNEKHYQFKSIRMDFYEQVLVNGKALTPQQAAHSSIYAQHKP* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2487 417 Gene3D - 277 417 IPR038645 -
Vra8g2487 417 Pfam Tetratricopeptide repeat protein 5 OB fold domain 298 408 IPR032076 -
Vra8g2487 417 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 9 340 - -
Vra8g2487 417 SUPERFAMILY TPR-like 72 244 IPR011990 GO:0005515
Vra8g2487 417 Coils Coil 147 167 - -
Vra8g2487 417 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 9 340 - -
Vra8g2487 417 Gene3D Tetratricopeptide repeat domain 3 276 IPR011990 GO:0005515
Vra8g2487 417 SMART tpr_5 100 133 IPR019734 GO:0005515
Vra8g2487 417 SMART tpr_5 220 253 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2487 8 42822920 42833137 Vra8g2487 8 42822920 42833137 ECH