Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2477 ATGGCCATTCCCTACCCTCATTTCATCGCCACTGAGAAGGCTGCCATGGACGCCGGCCTTCTCCTCCCTTCCTCCTCCCGCTCCCCCTCCGTCATATTCACCCAAGATGACCTCAAGAAGATCGCCGCCTACAAGGCCGTCGAGTACGTCGAATCCGGCATGGTTCTCGGCCTTGGCACTGGCTCCACCGCCAAGCACGCCGTCAACCGCATCGGCGAGCTTCTCCGCCAGGGCAAGCTCAAAGACATCGTTGGAATACCCACCTCCAAGATAACCCACGAACAGGCACTCTCCCTCGGGATCCCCCTGTCCGATCTCGACTCCCACCCTGTTGTCGATCTGGCCATTGACGGCGCCGACGAGGTTGACCCCTTTCTCAACCTTGTCAAGGGTCGCGGTGGCTCCCTCCTTAGGGAGAAGATGGTGGAGAGCGCGTGCAAGAAGTTTATTGTCATTGTTGATGAGTCCAAGCTTGTGAACTATGTAGGGGGGAGTGGATTGGCCATGCCCGTTGAGGTTATTCGGTTTTGTTGGAAGTTCACTGCTGAGAGGTTGCGCAAGCTCTTTGAGGAGGCTGGGTGTGTTGCCAAGCTTAGGACTTTTGGGGAGAAGGAGGAACCCTATGTCACGGACAATGGGAACTTCATTGTGGATTTGTATTTCAAGAGGAGTATTGGGGATTTGAAGGTTGCTAGTGACGCAATTCTGCAGCTTGCTGGGGTGGTGGAGCATGGCATGTTTCTAAATATGGCTACCACGGTTATTGTGGCAGGGGAGCTGGGCTTGACGGTGAAGAATAAATAG 804 0.5485 MAIPYPHFIATEKAAMDAGLLLPSSSRSPSVIFTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVNRIGELLRQGKLKDIVGIPTSKITHEQALSLGIPLSDLDSHPVVDLAIDGADEVDPFLNLVKGRGGSLLREKMVESACKKFIVIVDESKLVNYVGGSGLAMPVEVIRFCWKFTAERLRKLFEEAGCVAKLRTFGEKEEPYVTDNGNFIVDLYFKRSIGDLKVASDAILQLAGVVEHGMFLNMATTVIVAGELGLTVKNK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2477 267 CDD RPI_A 38 258 IPR004788 GO:0004751|GO:0009052
Vra8g2477 267 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 267 - -
Vra8g2477 267 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 167 248 - -
Vra8g2477 267 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 84 259 IPR004788 GO:0004751|GO:0009052
Vra8g2477 267 Gene3D - 161 245 - -
Vra8g2477 267 PANTHER ISOMERASE, PUTATIVE-RELATED 1 267 - -
Vra8g2477 267 SUPERFAMILY NagB/RpiA/CoA transferase-like 34 218 IPR037171 -
Vra8g2477 267 Hamap Ribose-5-phosphate isomerase A [rpiA]. 35 265 IPR020672 GO:0004751|GO:0009052
Vra8g2477 267 TIGRFAM rpiA: ribose 5-phosphate isomerase A 38 261 IPR004788 GO:0004751|GO:0009052
Vra8g2477 267 Gene3D - 38 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2477 Vra-Chr8 42764528 42765905 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2477 8 42764528 42765905 Vra8g2477 8 42764528 42765905 ECH
Vra8g2477 8 42764528 42765905 Vra11g0013 11 163604 164540 PCT