Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2469 ATGGGAGTTGACAGGAAATGGCTTTTCACTCTATTCAGTGCAGCATTGCTATCTCTCATGGTTCTGTTGATGTCCTCTTTCTCTGCTTTTAGTTCTCCCAAGGCTTTCCCTTCCCTTGTTCAGCATGGCTCTCACTACCCTCCAGCTTTTGCATACTTTATATCTGGTGGACACCAAGACAAGGACCGGATCTTGCGTTTGTTGTTGGCAGTTTACCATCCTAGGAATAGGTACCTCCTCCATCTTGGGAGGGATGCCAGGGATGAGGAGAGAAAAGCCCTGGTTGCCGCCACGAGGGCGGTGCCGGCCATTCGTGCTTTCGGGAACGTTGATGTGGTTGGAAAGGCTGATTATGTCACCTACTTGGGGTCCTCCAATGTGGCCATCGCTCTCCGGGCTGCAGCCATTATGCTCAAATTGGATAGTGGATGGAATTGGTTCATCACTTTGAGTGCACGGGATTATCCTCTCATCACACAGGATGATCTTTCCCACGTTTTCTCTTCCGTTAGGAGAGACCTGAATTTCATTGAGCACACTGGTGACCTTGGATGGAAAGAGAGCGATAGATTCCAGCCTATTGTAGTTGACCCGGCGTTATACTTAGCAAGAAAGAGTCAAATTTTTCAAGCTACAGAAAAGAGGGCAACTCCTAACGCATTCAAAATTTTCACAGGTTCGCCATGGGTAATCTTGAGCAGGCCCTTTCTGGAGTTCTGCATTTTTGGTTGGGACAATTTACCTCGAACTCTGCTGATGTACTTTACAAACGTGAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAATGCGCCAGAGTTCAAGAACACAACAGTAAATGGGAACTTACGATATATAGTCTGGGACGATCCTCCAAAGATGGAACCACTCTTCCTTAATGCTTCCGCTTACAATCAGATGGCAGAAAGTGGAGCTGCTTTTGCAAGACAGTTTCAATTTAATAATCCTGTGTTGGACATGATTGATGAGAAGATTCTCCATCGTGGTAGCCATCGAGCTACTCCAGGAGTGTGGTGCACTGGGCGGAGGAGCTGGTGGGCGGATCCGTGCTCCCAATGGGGTGATGTCAATATTGTAAAACCAGGTCCTCAGGCTAAGAAGCTTCAAGGGTCCGTTTCTAACCTTCTTGATGGCTGGAACTCACAGACTAATCAATGTCGGTGA 1191 0.4719 MGVDRKWLFTLFSAALLSLMVLLMSSFSAFSSPKAFPSLVQHGSHYPPAFAYFISGGHQDKDRILRLLLAVYHPRNRYLLHLGRDARDEERKALVAATRAVPAIRAFGNVDVVGKADYVTYLGSSNVAIALRAAAIMLKLDSGWNWFITLSARDYPLITQDDLSHVFSSVRRDLNFIEHTGDLGWKESDRFQPIVVDPALYLARKSQIFQATEKRATPNAFKIFTGSPWVILSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGNLRYIVWDDPPKMEPLFLNASAYNQMAESGAAFARQFQFNNPVLDMIDEKILHRGSHRATPGVWCTGRRSWWADPCSQWGDVNIVKPGPQAKKLQGSVSNLLDGWNSQTNQCR* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2469 396 PANTHER GLYCOSYLTRANSFERASE 4 395 IPR044610 GO:0015020
Vra8g2469 396 PANTHER OS01G0121800 PROTEIN 4 395 - -
Vra8g2469 396 Pfam Core-2/I-Branching enzyme 50 299 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2469 Vra-Chr8 42700507 42705510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2469 1 396 Glycosyltransferase AT1G71070 67.929 0.0 572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2469 8 42700507 42705510 Vra8g2469 8 42700507 42705510 ECH