Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2462 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTTAACATTCACTGTGATGGGTGTAAGCACAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGAACAGCAGAAAGTAACTGTTTCAGGTAGTGTGGATTCTGCAACCTTGATCAAGAAGCTGGTGAGAGCTGGTAAATATGCCGAGCTCTGGTCTCAGAAAACAAACCAGAACCAAAAGCAGAAGAACAACAACGCGAAGGATGACAAGAACAAAGGACAAAAGCAAGGCCTTGCAAAGGGGCTTGATGCCTTCAAGAACCAGCAAAAGTTTCCTGCTTTTAGTTCTGAAGAGGATGAATACTACTCTGAATATGAAGACGATGATGAGGAAGAAGATGAAGAAATGCGGTTTCTAAGGGAGAAAGCCCATCATCTGCAGATGCTCAAGCAGCAAGCAGCTAATGCAAATGTGAGGAAAAGTATGGGGGGCATGGGAGCAGGTGCCATCAACGGTAAGATGAACAATGGGGGTGGCAATGGTGGTGGTGGTGGTGGCAAGAAAGGAGGCCCGAATCCGAATATGGGAATGAAGGAGAGTCCGAATGGGGGGCTTGATCAGAAAACAATGGCAGCCCTAAAATTGAACGGTGGTCATGTGGGTGGTGAAGGCCTCGGCCTCAATCTTGGTGAAGCAAAAAGGGCCAATGACATTGGGGCCATGATGAATATGGCTGGTTTTAACGGCAACGGTGGCAATGTCACCAGTGCCACTGTTCTAGGAGCTAATAATTCTAGTGGCATGGGAGGTTTTCCTGTTCAGTCCAATAACATGATTCCAGGGTCCTCTGCCGGTTTTTCAAATGGGGGTATTGGTGCTGGGCAATACCCATCTTCTCTGTTGATGAACATGAATGGGTTCAACAACCATCCATCCCCATCGCCATTGATGATGAACATGAACATGAACATGCAGGCTAGACAAGCCATGCAACAACAGCCCCAGATGATGTATCACAGGTCTCCCTTGATTCCCCCTAACACTGGGTATTACTACAACCATAGTAATAGCTACAGCCCTGCACAATACTCCTATTCCTATGGCTTGCCTAGTTACCCTGGGGGTGATGATCACTCTGCGACTCACATGTTCAGTGATGACAACACCAGCAGCAGTTGTTCAATAATGTAA 1209 0.4591 MTKEEDFKLLKIQTCVLKVNIHCDGCKHKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDSATLIKKLVRAGKYAELWSQKTNQNQKQKNNNAKDDKNKGQKQGLAKGLDAFKNQQKFPAFSSEEDEYYSEYEDDDEEEDEEMRFLREKAHHLQMLKQQAANANVRKSMGGMGAGAINGKMNNGGGNGGGGGGKKGGPNPNMGMKESPNGGLDQKTMAALKLNGGHVGGEGLGLNLGEAKRANDIGAMMNMAGFNGNGGNVTSATVLGANNSSGMGGFPVQSNNMIPGSSAGFSNGGIGAGQYPSSLLMNMNGFNNHPSPSPLMMNMNMNMQARQAMQQQPQMMYHRSPLIPPNTGYYYNHSNSYSPAQYSYSYGLPSYPGGDDHSATHMFSDDNTSSSCSIM* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2462 402 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 402 - -
Vra8g2462 402 MobiDBLite consensus disorder prediction 80 140 - -
Vra8g2462 402 CDD HMA 16 75 IPR006121 GO:0046872
Vra8g2462 402 Gene3D - 12 84 - -
Vra8g2462 402 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Vra8g2462 402 Coils Coil 128 148 - -
Vra8g2462 402 Coils Coil 82 102 - -
Vra8g2462 402 Pfam Heavy-metal-associated domain 17 70 IPR006121 GO:0046872
Vra8g2462 402 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Vra8g2462 402 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 402 - -
Vra8g2462 402 MobiDBLite consensus disorder prediction 125 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2462 Vra-Chr8 42635827 42638194 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2462 8 42635827 42638194 Vra8g2462 8 42635827 42638194 ECH