Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1063 ATGATGATGATGTTTGAGGAGATGGGGTTTTGTAGTGATTTGGACACGATGTCTACTGTCCTCGGGGACGAGGATATCAGCACCCGGCAAACTGATCCAGAGGCGATAGTTGAGGATGATTTCAGTGATGAAGAAATTGGGGTAGATGAGCTTGAAAGGAGGATGTGGAAGGATAAGATGCGTCTCAAGCGATTGAAGGAGCAGAGTAAATCTAAGGAAGGGATTGATGCGGTGAAGCAAAGACAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTTCAGGGCTCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGGAAACCAGTGACAGGAGCATCTGATAATCTTCGTGAATGGTAG 414 0.4565 MMMMFEEMGFCSDLDTMSTVLGDEDISTRQTDPEAIVEDDFSDEEIGVDELERRMWKDKMRLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMFRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREW* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1063 137 Pfam Ethylene insensitive 3 49 137 IPR006957 GO:0005634
Vra8g1063 137 Gene3D - 81 137 IPR023278 GO:0003700|GO:0005634
Vra8g1063 137 Coils Coil 48 68 - -
Vra8g1063 137 MobiDBLite consensus disorder prediction 67 90 - -
Vra8g1063 137 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 137 - -
Vra8g1063 137 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 137 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1063 Vra-Chr8 24877608 24878241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1063 3 137 EIL Transcription Factor Family AT3G20770 76.642 7.31e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vra8g1063 EIN3 4.3e-40 No_clan