Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3585 ATGCCTCTTCTAAGGAGAAAGCCTTTTGCCTTGGCTGAGCCCCCTGAGGAATTGAAGCCAGACGAGCTTGTTTACCAAATTCGATTTACAAAAGAAATCTTTCGAGATTATCCTGATTATTTGAAGCGATTGAATCAATACCGTCAGAGGGTTTGGATGTGTAAAGTCACTGGAAAAACTGGCTTGACTTATGAAGAGGCCATAGTGTCTGAACAACATGCTACTGAGAAAGTTCAACAGTTTCCCAAGGAATTAATGACTACTGCTTTAGGGATTATTCAATACAGCACGCTCCCTTTGAAGGATCTTGCTGATTCTATTGGTGAAAAATTGCAGAAACGTTTGTTTGTCGGTGCTGAACTACATGGGAAAAAGGGTGATGAAGTACATCCATGCAGAATATTAAAAGTAATTCAGAAAGGAGTTGACACATTCCGTTATGAGGTAGCTTGGCTTGACAAAAACAAAAATATAAGTGAACAAGCTGAACTCTGTGCAGAAGATTTGGTGCATAAGAAGCCGCTTTTTAGTAGAAATATTTTGAAGTCTTTTGTTCGGGAATCTACATGCCAGAATGCCCCATGGGTTTTACATGATGAATTAGCAAAAGGTTATGGAATATCAACTGACATTCCTAAAGAATTAAGAGGGAGGGTTTTTTACAGAGATGGACTTCTAATTTGCTCCAAGAAAAGGAAAAATGAGGAATCACTGGAAGACACTGATAACAGTAAAAGGAAGAAGTTGGATGGGGCACAAGTTGATGATTCTTGCCAAGAGAAAGAAAATGCTCAACAGAAGAATGAAGCTATCAAATACCCAATTGATGATCTCTTGGTGAAACCTGGTCCGGATGATCCTGTTTTCACTGATCGTCCTTCTCCATCAAAAGACTTCAACATTCCAATGAGTTGTGTTGGGGATCTCTTAATGGTTTGGGATTTGCTTAATTCCTTTGGTAGACTGTTGCACCTGTGGCCTTACTCTCTAGAAGATTTTGAAAATGCAATCTGTCATAAGGATAGCAATGTGGTTCTCCTTGTGGAATCTCATGCAGCACTTTTTCGATTTCTCATCAAAGATGACGATGAATACTCTTCGGCTGTGAAGAACCGAAAGTTAAAGTCTAAGATTACAATGAATAATTGGACAGAATATTTATGCTATTTCCTAGAGGTGATCAATATTCCTGAACTGCGGCATCATGAAGCAACTATAAAACGGGGACATTATGGCCTTGTAGATGTCAGTGCTAAATTAGAAATCTTATCCAAATTGGTCAACCAAGCCCTTGAAACTGCAATTTTCAGGGAAAAGTTAGATGAGATTATTGAACAGCGGCAGGCACTTGGGGCCTCCAGAAGGGAAGAAGCATTGGAAAAGGGTAGGAGGAGAAGAGAAGAAAAGGAACGGTTGAAAGCTGAGTCCAGAAGCAATGGATTTGTGGATGGGCCTCTGAGTGGTGCTAAAGTACCAACGAATGATAATCATGGTATACAAAATGGAGACATGGATGAGAAAAGTCTTATAGAGGTAGAACCAACTGGGCAAAACAGACAATTGGATAGAAGNGAGATNAAGCCTTTAAATTCTGTTTCAAAAAAGACGCATAAGAAGCTAAATTCAGAGCTGAAAGAACCAACTAAAAATGGAAAAGAATTGTCCAGAAAGGAATCACCAAAACAGTCGAAAGCTGATAAGGAGGATCTGTCAGAGAAGAACAGTGAAGAACAGAGGAAAGAATATTTCGAAAAGGAGATGGAGAAACGATTTGTTCGTAGAAGTCCATTAGGTAAAGACAGAGATTACAATAGGTATTGGTGGTTCCGTCGAGATGGGAGGATATTTGTTGAAAGCTCTGACTCCAAGGAATGGGGATACTACAGCAGTAAGGAAGAGCTCGATGCATTGATGAGTTCACTGAATTGCAAGGGTGAGCGGGAAAGGGCACTGCAAAAGCAACTACAAAAATATTATACTAAAATATGCTCAGAACTCCAGAAAAGGTCAAAGGATTTGATGCACAGGATTATAGATGAATCTGTACTTCGTAGGTCTACTCGTGTTAGAGCTCCACCTAGACAGAATCCTGCCAATGCTTTCCTCAGATATGTTAACAAGTGGAAAGAAGAATAG 2136 0.397 MPLLRRKPFALAEPPEELKPDELVYQIRFTKEIFRDYPDYLKRLNQYRQRVWMCKVTGKTGLTYEEAIVSEQHATEKVQQFPKELMTTALGIIQYSTLPLKDLADSIGEKLQKRLFVGAELHGKKGDEVHPCRILKVIQKGVDTFRYEVAWLDKNKNISEQAELCAEDLVHKKPLFSRNILKSFVRESTCQNAPWVLHDELAKGYGISTDIPKELRGRVFYRDGLLICSKKRKNEESLEDTDNSKRKKLDGAQVDDSCQEKENAQQKNEAIKYPIDDLLVKPGPDDPVFTDRPSPSKDFNIPMSCVGDLLMVWDLLNSFGRLLHLWPYSLEDFENAICHKDSNVVLLVESHAALFRFLIKDDDEYSSAVKNRKLKSKITMNNWTEYLCYFLEVINIPELRHHEATIKRGHYGLVDVSAKLEILSKLVNQALETAIFREKLDEIIEQRQALGASRREEALEKGRRRREEKERLKAESRSNGFVDGPLSGAKVPTNDNHGIQNGDMDEKSLIEVEPTGQNRQLDRXEXKPLNSVSKKTHKKLNSELKEPTKNGKELSRKESPKQSKADKEDLSEKNSEEQRKEYFEKEMEKRFVRRSPLGKDRDYNRYWWFRRDGRIFVESSDSKEWGYYSSKEELDALMSSLNCKGERERALQKQLQKYYTKICSELQKRSKDLMHRIIDESVLRRSTRVRAPPRQNPANAFLRYVNKWKEE* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3585 711 Coils Coil 455 475 - -
Vra7g3585 711 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 709 - -
Vra7g3585 711 Pfam DDT domain 304 361 IPR018501 -
Vra7g3585 711 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Vra7g3585 711 MobiDBLite consensus disorder prediction 528 581 - -
Vra7g3585 711 SMART testlast3 303 364 IPR018501 -
Vra7g3585 711 MobiDBLite consensus disorder prediction 461 581 - -
Vra7g3585 711 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Vra7g3585 711 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Vra7g3585 711 MobiDBLite consensus disorder prediction 238 266 - -
Vra7g3585 711 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 593 658 IPR028941 -
Vra7g3585 711 MobiDBLite consensus disorder prediction 461 477 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3585 406 657 Homeobox Transcription Factor Family AT1G28420 27.652 7.55e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Vra7g3585 WAC_Acf1_DNA_bd 2.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3585 - - var:108323886 1365.52