Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3165 ATGAGAACCCAACACCTTCGCCTTCACCATCTCCTCCTCAGTCTCTTCCTCTTCGCAGCCACATTCTCTCCGGCGCCCGCCGCCGCAGACGACGTTTCGGCCCCTGCGCCTGACGACGGCGACACCGAGTTCATCCGCTCAAGCTGCAACTCCACTCTATACCCCGACGTGTGCTTCACCTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAGAACCCCGGCCAGTTGGCGCGCGTGGCCATCGGCGTCAGTCTCTCCAAGGCCCACCGCGTCGCGTCCTACATCTCCAACCTAACGCACGAAGCCGACTATGGCACGAGTGGCACGCGCGCGGCGATGGCGCTGCACGACTGCTTCTCGAACCTTGGCGACGCCGTGGACGAAATCCGCGGGTCTCTGAAGCAGATGCGGCAGATTGGCGCAGCCGGCGAGGGCTCCGAATCCTTCCTCTTCCAGATGAGCAACGTGCAAACGTGGATGAGCGCCGCACTCACCGACGAGGAGACCTGTACGGACGGATTCCAGGACGTACCGGAATGTCCCGTGAAAGCGGATGTATGCAATCGCGTCACCAACGTTAAGAAGTTCACCAGCAACGCTTTGGCCCTCGTGAACTCCTACGCCAGCAAGGGTTCGCCCTGA 642 0.6215 MRTQHLRLHHLLLSLFLFAATFSPAPAAADDVSAPAPDDGDTEFIRSSCNSTLYPDVCFTSLSRYANAVQQNPGQLARVAIGVSLSKAHRVASYISNLTHEADYGTSGTRAAMALHDCFSNLGDAVDEIRGSLKQMRQIGAAGEGSESFLFQMSNVQTWMSAALTDEETCTDGFQDVPECPVKADVCNRVTNVKKFTSNALALVNSYASKGSP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3165 213 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 9 210 - -
Vra7g3165 213 Pfam Plant invertase/pectin methylesterase inhibitor 44 203 IPR006501 GO:0004857
Vra7g3165 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 210 - -
Vra7g3165 213 CDD PMEI-like_3 47 209 - -
Vra7g3165 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 207 IPR035513 -
Vra7g3165 213 SMART PMEI_2 40 203 IPR006501 GO:0004857
Vra7g3165 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 207 IPR035513 -
Vra7g3165 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 207 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3165 Vra-Chr7 51382943 51384191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3165 42 203 Carbohydrate Esterase AT5G53370 28.049 8.94e-14 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3165 7 51382943 51384191 Vra7g3165 7 51382943 51384191 ECH