Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1185 ATGGCTCTAGGTGACGATGCACAGCACCATTCTCCCTCCATCCTCGATGCCCTTCTCTGCGAAGAGCGTGATACCTTCGAGGAAGATTTGGATGCGAACGGCGGTGAGTGTGAGATCAACGACGATGACCCATCTGGGAGAAAGTTGCAATCTTTGCCTTTGGCTTTGCTTCAGAATGATCTGTTCTGGGAAGATGAAGAGCTTGTGTCTTTAATCTCCAAAGAGGGAGAGACCCATTCCTGTTCTCTTAGTTCCATTGCTGATGGGCCCTTAGAAGGGTCTCGTGTGGAGGCTGTGAACTGGATTTCAAAAGTCTGTGGACATTATGGGTTTTCTGCTTTGACCACTGTTCTTGCTGTCAACTACTTTGATCGGTTCATCCCATGTCTGAGGTTTCACAGGGACAAGCCGTGGATGACACAGCTCACTGCTGTTGCTTGTTTGTCCCTTGCTGCAAAAACGGAAGAGACCCATGTGCCGCTTCTTTTGGACCTTCAAGTGGAGGAATCGAGATTTGTGTTTGAGGCGAAGACCATTCAGAGAATGGAGCTGCTGGTTCTGTCAACTCTTAAATGGAGGATGCATCCGGTGACTCCAATTTCTTTCTTTGAACACATTGTCAGAAGGCTTGGTTTGAAGAGTCGCTTGCATTGGGAGTTTCTATGGCGTTGTGAGCGGGTTCTTCTCAATGTCACTGCGGATTCAAGGGCTATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAATCATTTAACGCTACAAAGTACATTGATCAGCTTCTTGGTTTACTAAAGATTAGCGAGGAACAAGTGAACCAGTGCTACAAGCTCATGCAGAAAATATTAGGTCGCTATGAAGGCATTTACAGCCTTCACCAGAAACGCAAGCGTCTAACTGAACCAAGTAGCCCAGGTGGTATCCTTGATTCAACTTTCAGCTGTGATAGCTCAAATGATTCGTGGGCATTGTCATCATCAGTCTCACTCTCACTGGAGCCGCTGTTTAAGAGGAGAAGACCTCAGGACCAGCAAATGCGGCTGCCTTCTGTTAGTCGCGTGTCAATTGATGTTCTTAATAGCCCTCGTTAA 1116 0.4651 MALGDDAQHHSPSILDALLCEERDTFEEDLDANGGECEINDDDPSGRKLQSLPLALLQNDLFWEDEELVSLISKEGETHSCSLSSIADGPLEGSRVEAVNWISKVCGHYGFSALTTVLAVNYFDRFIPCLRFHRDKPWMTQLTAVACLSLAAKTEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCERVLLNVTADSRAMSYLPSTLAAATMIHVIKEIESFNATKYIDQLLGLLKISEEQVNQCYKLMQKILGRYEGIYSLHQKRKRLTEPSSPGGILDSTFSCDSSNDSWALSSSVSLSLEPLFKRRRPQDQQMRLPSVSRVSIDVLNSPR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1185 371 PANTHER CYCLIN-D3-2 8 354 - -
Vra7g1185 371 Pfam Cyclin, N-terminal domain 94 194 IPR006671 -
Vra7g1185 371 SUPERFAMILY Cyclin-like 62 195 IPR036915 -
Vra7g1185 371 Gene3D - 93 195 - -
Vra7g1185 371 SMART cyclin_7 100 188 IPR013763 -
Vra7g1185 371 PANTHER CYCLINS 8 354 IPR039361 -
Vra7g1185 371 SUPERFAMILY Cyclin-like 179 292 IPR036915 -
Vra7g1185 371 CDD CYCLIN 94 187 IPR013763 -
Vra7g1185 371 Gene3D - 196 285 - -
Vra7g1185 371 SMART Cyclin_C_2 197 310 IPR004367 -
Vra7g1185 371 Pfam Cyclin, C-terminal domain 197 294 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1185 Vra-Chr7 28059207 28061162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1185 7 361 Core Cell Cycle Gene Families AT5G67260 51.240 4.03e-111 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1185 7 28059207 28061162 Vra11g0553 11 4237101 4238818 PCT