Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1107 ATGCCATCCTCCAACTCCGGCGAGACCCGCCGACCATCCAAGCCTCAGACCTCTGCCGGAGCGCCGCCACCTCCAGAGCAAGAAAACCTCCCCTGCCCCCGTTGTGAGTCAACCAACACTAAGTTCTGCTACTACAACAACTACAACTACTCCCAGCCGCGCCACTTCTGCAAGTCTTGCCGCCGGTATTGGACCCATGGCGGCACCCTCCGCGATATACCCGTCGGCGGTGGCAGTCGCAAGAATGCCAAGCGTTCACGCACCCACCACACTGCCACGTCATCCTCCTCCTCCACCATGACTTCACCTCAGGAGCACGCTCTTCCTGCATTGGCCCCTGTCCAAACGACCCAAGGAGGGTCCATGCACTTCGTGGACGGTGACGTTAATAAACAGAATAACGTGAATGTCTGCGGGAGCTTCACCTCTTTGCTGAACAACAGCCAGGGCAATGGGTTTCTCGCCCTCGGCGGGTTTGGACTTGGGCTCGGACACGGGTTCGATGATATGGGCTTTGGGATTGGCAGGTCGGGCTGGGGCTTCCCCGGAATGGTGGATGGTGCCAACATGGGCAGCGGCGTTCCCTCCTCTGGATTGAGCCCGTGGCAGTTAGAGAGTGGCGAAGGTGGGTTTGTTAGTGGAGACTGTTTTTCGTGGCCTGGGCTTGCCATTTCCACACCAGGGAATGGTCTCAAATGA 699 0.5851 MPSSNSGETRRPSKPQTSAGAPPPPEQENLPCPRCESTNTKFCYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTHHTATSSSSSTMTSPQEHALPALAPVQTTQGGSMHFVDGDVNKQNNVNVCGSFTSLLNNSQGNGFLALGGFGLGLGHGFDDMGFGIGRSGWGFPGMVDGANMGSGVPSSGLSPWQLESGEGGFVSGDCFSWPGLAISTPGNGLK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1107 232 MobiDBLite consensus disorder prediction 71 105 - -
Vra7g1107 232 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 229 IPR045174 GO:0003700|GO:0006355
Vra7g1107 232 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Vra7g1107 232 MobiDBLite consensus disorder prediction 1 16 - -
Vra7g1107 232 MobiDBLite consensus disorder prediction 1 32 - -
Vra7g1107 232 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Vra7g1107 232 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 229 - -
Vra7g1107 232 MobiDBLite consensus disorder prediction 89 105 - -
Vra7g1107 232 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1107 Vra-Chr7 26889069 26890454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1107 1 232 C2C2-Dof Transcription Factor Family AT3G50410 49.804 1.67e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vra7g1107 zf-Dof 9.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1107 - - gmx:778095 337.421