Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1070 TTGGATGGCGAGGGTTGTAACGGTGGTTGCAATCGCGTGGTGGCGACCGTAGAGGCCCAACCGGAGGCCAAATTCGTGTGCAACAGCGCGAACAACTCAAGGTGTGGCGCCCTCATAGGGTACTCTCACACGAACGGCACCACCCTTGGCGACATCCAAACCCTCTTCACCGTGAAGAAACTTGTGGACATCCTAGGCGCCAACAACCTCCCGAGCAACACCACAAAGAGCCACGTGGTGGGGCCCAACGAGGTTGTGAAGGTGCCGTTCCCGTGCAGGTGCAGCAACGGGACTGGACTCTCGGACGGGGTTCCACTTTATAAGATAAAAAAGGGGGACACGCTGTACGACATAGCGACGACGACGTTTGGGGGTTTGGTGAAGTATCCGCAGATCAAGGTGGCGAATAAGTTACCGGACGAGAATAACATCACCGCCGGGGACACGCTTTATATTCCGCTGCCGTGTAGCTGCGATGCGGTGGATGGGAACAGAGTGGTGCACTATGCGCACCTGGTGTTGACGGGGAGCACGGTGGAGGGAATTGCTGAGCAATTTGGCACCACTCAGCAGACACTCCTCACTCTGAATGGCATTTCCGACCCCAAAACGCTTCAGGCCGGTCAGATTCTTGATGTTCCTCTTCGAGCTTGTTCCTCGAGTGTGAAAAATGATTCCTTGGACTATCCATTGCTTGTTGCAAATTCTTCTTACGCCTATACTGCCAACGAATGCGTCAAATGCAGCTGTGAGTCCAGCAACAACTACATATTACAATGCGAGCAATCCCACCTCAAACCACCAAGCAACGTCTTCATTGGCAACACCACTTCCTCTACTGATCCCTGCAACCGCACAGTCTGTGCCTATACTGGTTATACATTCAACAATATCTCAGCAGAACTTGTAACGCAGAACACTTGTGCAGTGCCAACGAGTCCTTCAGGAGGATCTGGTGGTTCTGGTTCGGGAGCTCCCAGGAGCACTTTGCAAGGCTTGCTTTGGAGTAATCTTTTCATTCTTATTCACTTTGTTCTCTTCCTTGTCTATGTTTTGTAG 1059 0.5203 LDGEGCNGGCNRVVATVEAQPEAKFVCNSANNSRCGALIGYSHTNGTTLGDIQTLFTVKKLVDILGANNLPSNTTKSHVVGPNEVVKVPFPCRCSNGTGLSDGVPLYKIKKGDTLYDIATTTFGGLVKYPQIKVANKLPDENNITAGDTLYIPLPCSCDAVDGNRVVHYAHLVLTGSTVEGIAEQFGTTQQTLLTLNGISDPKTLQAGQILDVPLRACSSSVKNDSLDYPLLVANSSYAYTANECVKCSCESSNNYILQCEQSHLKPPSNVFIGNTTSSTDPCNRTVCAYTGYTFNNISAELVTQNTCAVPTSPSGGSGGSGSGAPRSTLQGLLWSNLFILIHFVLFLVYVL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1070 352 ProSiteProfiles LysM domain profile. 169 213 IPR018392 -
Vra7g1070 352 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 308 - -
Vra7g1070 352 Gene3D LysM domain 106 159 IPR036779 -
Vra7g1070 352 CDD LysM 107 152 IPR018392 -
Vra7g1070 352 SUPERFAMILY LysM domain 169 214 IPR036779 -
Vra7g1070 352 Gene3D LysM domain 160 226 IPR036779 -
Vra7g1070 352 CDD LysM 171 213 IPR018392 -
Vra7g1070 352 Pfam LysM domain 173 214 IPR018392 -
Vra7g1070 352 Pfam LysM domain 107 153 IPR018392 -
Vra7g1070 352 ProSiteProfiles LysM domain profile. 105 152 IPR018392 -
Vra7g1070 352 SUPERFAMILY LysM domain 106 154 IPR036779 -
Vra7g1070 352 SMART LysM_2 170 214 IPR018392 -
Vra7g1070 352 SMART LysM_2 106 153 IPR018392 -
Vra7g1070 352 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 308 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1070 16 270 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 54.510 1.93e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1070 - - gmx:100804190 464.536