Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0986 ATGGAGAAAAACTATGTTCAGCTTTTGCCTCGTCTCACTGTGACACTTCTAGTGATCACTGTTTTGTTTCCTGTGACTGAATGTGCTGCAGTTTCCTCCATCAAGACTGATGCGCAGGCTCTTCTCATGTTCAAAAGGATGATTCAGAAGGATCAAAGTGGAATTTTGTCAGGGTGGAAGCTCAATAAGAATCCATGCAGCTGGTATGGAGTCTCTTGCACCCTTGGAAGAGTTACTCAGCTTGATATTAGTGGGAATAATGACCTTGCTGGGACAATATCTCTTGATCCTTTGTCTTCTTTAGATATGTTATCTGTTCTCAAACTGTCTTTGAATTCATTTTCTGTAAATTCTACCTCTTTACTTCAGCTCCCTTATGGTTTGACACAGCTTGATTTATCCTTTGGAGGAGTTACAGGCCCTGTCCCTGATAACCTTTTCTCCAAGTGTCCGAATCTTGTTGTTGTTAATCTTTCGTACAACAACTTAACAGGGCCTATTCCTGAAAATTTCTTACAAAATTCTGATAAACTGCAGACCCTTGACCTCTCTTCCAACAACCTGTCAGGGTCTATTTTTGGCCTTAAAATTGATTGCATTTCCTTGTTGCAACTTGATCTTTCTGGAAACCGCTTGTCAGACTCCATTCCACTCTCTTTGTCAAACTGTACCAGCCTTCAAAGTTTGAATTTAGCTAACAATATGATTTCTGGGGGAATTCCCAAAGGTTTGGGTCAGCTAAACAAACTACAGACTCTGGATCTTTCCCACAACCAACTCACAGGCTGGATCCCTTCTGAGCTGGGAAATGCATGTGCTTCCCTTTTAGAGGTTAAACTTTCTTTCAACAACATCTCCGGGTCAATCCCATCAGGTTTCTCCTCGTGCACTTTGCTGCAACATCTTGACATAGCTAACAACAACCTGTCGGGACCGTTAGCAGATTCAATCTTTCAGAACCTCGGATCATTGCAGGAACTGTGGCTGGGGAATAATGCTATCAGTGGTCAATTTCCATCTTCATTATCTTCCTGCAAGAAGTTGAAGATTGCGGACTTCAGCTCAAACAAAATTTATGGATCTATCCCCAGGGATTTATGTCCTGGGGCAGCCTCACTTGAGGAGCTGAGAATGCCAGATAATCTTATTACAGGTGAAATTCCAGCTGAACTGTCAAAGTGCTCACAGCTGAAGACACTTGATTTTAGTCTGAACTATCTCAATGGTACAATTCCAGAGGAGCTTGGTCAACTTGAAAATCTTGAGAAGCTAATAGCATGGTTCAATGGCTTGGAAGGAAAAATTCCTTCAAAACTGGGCCAGTGCAAGAATCTTAAGGATCTCATACTGAATAACAATCATCTAACTGGTGGAATTCCCATTGAGTTATTCAATTGCAGCAATCTGGAATGGATATCACTGACAAGCAATGAGCTTAGTGGTGAAATACCGCGTGAGTTTGGTCTCTTGACAAGGTTAGCAGTTCTGCAGCTTGGAAACAACAGCTTGACTGGCGAGATACCAGCAGAGCTAGCGAATTGCAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACTGGAGAGATCCCTTCAAGACTTGGAAGACAGCTAGGAGCAAAATCCTTGTTTGGGATCCTTTCAGGGAACACTTTGGTGTTTGTAAGAAATGTTGGAAACTCATGCAAAGGAGTAGGAGGTTTGCTAGAATTCTCTGGTATTCGACCTGAAAGGCTCTTGCAGGTTCCAACATTGAGGACTTGTGACTTCACAAGACTCTATTCTGGTCCTGTCCTCAGCTTGTTCACCAAGTACCAGACTCTGGAGTATCTTGATCTTTCATATAACGAACTTCGAGGAAAAATCCCAGATGAATTCGGAGACATGGTGGCTTTACAAGTTCTTGAATTATCTCACAATCAGCTATCTGGAGAAATCCCTTCAACGCTTGGCCAGTTAAAAAATTTGGGTGTGTTCGATGCATCACACAACAGATTGCAAGGACATATTCCAGACTCATTCTCAAACCTCTCATTCTTGGTTCAAATTGATCTATCTAACAACGAGTTAACAGGGCAAATTCCCTCAAGGGGACAACTGAGTACACTTCCAGCTTCCCAGTATGCAAATAACCCTGGCCTTTGTGGTGTACCATTGCCTGACTGCAAGAGCGACAATAGCCAACCCACAACAAATCCAACTGAAGATGCTGGCAAAGGGGGCCATAAAACAGCAACTGCAACATGGGCAAACAGCATTGTCATGGGAACTCTCATATCTGTTGCTTCTGTATGTATTTTAATCGTGTGGGCAATTGCAATGCGCGCAAGGAGAAAGGAGGCCGAAGAAGTCAAGATGCTCAATAGCTTACAAGCATGCCATGCTGCAACAACATGGAAAATCGACAAAGAGAAAGAGCCACTAAGCATCAATGTTGCAACATTTCAGAGGCAGCTGAGGAAACTTAAATTCTCCCAGTTGATCGAAGCAACTAATGGGTTCTCGGCAGAAAGCCTAATTGGGTGTGGAGGTTTTGGTGAAGTGTTCAAGGCCACACTCAAAGACGGGTCAAGTGTGGCCATAAAGAAGCTGATTCGATTGAGCTGCCAGGGTGATCGAGAATTCATGGCAGAGATGGAAACATTGGGGAAGATCAAGCACAGAAATCTGGTTCCTCTGTTAGGATACTGCAAAGTGGGGGAAGAGAGGCTCCTTGTGTACGAATACATGGAGTATGGAAGCCTAGAAGAGATGCTTCATGGGAGAATAAAGACGCGTGATCGGCGCATTTTGACATGGGAAGAAAGGAAAAAGATTGCAAGAGGTGCAGCTAAAGGGCTTTGTTTCCTGCACCATAATTGCATCCCTCACATCATACACAGAGATATGAAGTCAAGCAATGTGCTACTTGACCATGAAATGGAGTCAAGAGTATCAGATTTTGGAATGGCGAGACTTATAAGTGCCCTTGATACACATCTTAGTGTGAGCACACTGGCAGGAACACCTGGATATGTTCCACCAGAGTACTACCAGAGTTTCAGGTGCACTGCTAAGGGAGATGTCTACTCATTTGGAGTTGTGATGTTAGAACTGCTTAGTGGTAAACGCCCTACTGACAAGGAGGATTTTGGTGACACCAACTTGGTTGGGTGGGCAAAGATGAAGGTCCGTGAAGGGAAGCAAATGGAAGTAATTGATTCGGACTTGCTTTTGGCCACTCAAGGAACTGATGAAGCAGAAGCCAAAGAAGTGAAAGAGATGATAAGATATTTAGAGATTACTTTGCAATGTGTTGATGACTTGCCTTCAAGAAGGCCAAACATGTTGCAGGTAGTTGCTATGCTCAGAGAGCTTATGCCTGGATCAACAGATGGAAGCAGCAACAGTGCTTGA 3399 0.4351 MEKNYVQLLPRLTVTLLVITVLFPVTECAAVSSIKTDAQALLMFKRMIQKDQSGILSGWKLNKNPCSWYGVSCTLGRVTQLDISGNNDLAGTISLDPLSSLDMLSVLKLSLNSFSVNSTSLLQLPYGLTQLDLSFGGVTGPVPDNLFSKCPNLVVVNLSYNNLTGPIPENFLQNSDKLQTLDLSSNNLSGSIFGLKIDCISLLQLDLSGNRLSDSIPLSLSNCTSLQSLNLANNMISGGIPKGLGQLNKLQTLDLSHNQLTGWIPSELGNACASLLEVKLSFNNISGSIPSGFSSCTLLQHLDIANNNLSGPLADSIFQNLGSLQELWLGNNAISGQFPSSLSSCKKLKIADFSSNKIYGSIPRDLCPGAASLEELRMPDNLITGEIPAELSKCSQLKTLDFSLNYLNGTIPEELGQLENLEKLIAWFNGLEGKIPSKLGQCKNLKDLILNNNHLTGGIPIELFNCSNLEWISLTSNELSGEIPREFGLLTRLAVLQLGNNSLTGEIPAELANCSSLVWLDLNSNKLTGEIPSRLGRQLGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGKIPDEFGDMVALQVLELSHNQLSGEIPSTLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPDCKSDNSQPTTNPTEDAGKGGHKTATATWANSIVMGTLISVASVCILIVWAIAMRARRKEAEEVKMLNSLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKMKVREGKQMEVIDSDLLLATQGTDEAEAKEVKEMIRYLEITLQCVDDLPSRRPNMLQVVAMLRELMPGSTDGSSNSA* 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0986 1132 MobiDBLite consensus disorder prediction 724 738 - -
Vra7g0986 1132 SUPERFAMILY Protein kinase-like (PK-like) 816 1117 IPR011009 -
Vra7g0986 1132 ProSiteProfiles Protein kinase domain profile. 835 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0986 1132 Gene3D Ribonuclease Inhibitor 147 723 IPR032675 -
Vra7g0986 1132 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Vra7g0986 1132 Pfam Leucine rich repeat 602 643 IPR001611 GO:0005515
Vra7g0986 1132 Pfam Leucine rich repeat 202 260 IPR001611 GO:0005515
Vra7g0986 1132 Gene3D Transferase(Phosphotransferase) domain 1 911 1129 - -
Vra7g0986 1132 CDD STKc_IRAK 841 1120 - -
Vra7g0986 1132 Gene3D Ribonuclease Inhibitor 36 146 IPR032675 -
Vra7g0986 1132 Pfam Brassinosteroid receptor island domain 545 603 IPR045381 -
Vra7g0986 1132 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Vra7g0986 1132 SUPERFAMILY L domain-like 59 314 - -
Vra7g0986 1132 Pfam BspA type Leucine rich repeat region (6 copies) 289 383 IPR026906 -
Vra7g0986 1132 PRINTS Leucine-rich repeat signature 178 191 - -
Vra7g0986 1132 PRINTS Leucine-rich repeat signature 247 260 - -
Vra7g0986 1132 Gene3D - 548 604 - -
Vra7g0986 1132 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 1121 - -
Vra7g0986 1132 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 23 1121 - -
Vra7g0986 1132 SMART LRR_typ_2 199 223 IPR003591 -
Vra7g0986 1132 SMART LRR_typ_2 247 271 IPR003591 -
Vra7g0986 1132 SMART LRR_typ_2 443 466 IPR003591 -
Vra7g0986 1132 SMART LRR_typ_2 150 174 IPR003591 -
Vra7g0986 1132 SMART LRR_typ_2 490 514 IPR003591 -
Vra7g0986 1132 SMART LRR_typ_2 418 442 IPR003591 -
Vra7g0986 1132 SMART LRR_typ_2 321 345 IPR003591 -
Vra7g0986 1132 SMART LRR_typ_2 630 654 IPR003591 -
Vra7g0986 1132 SMART LRR_typ_2 515 538 IPR003591 -
Vra7g0986 1132 ProSiteProfiles Leucine-rich repeat profile. 201 222 IPR001611 GO:0005515
Vra7g0986 1132 ProSitePatterns Protein kinases ATP-binding region signature. 841 864 IPR017441 GO:0005524
Vra7g0986 1132 SUPERFAMILY L domain-like 573 719 - -
Vra7g0986 1132 SUPERFAMILY RNI-like 240 537 - -
Vra7g0986 1132 ProSiteProfiles Leucine-rich repeat profile. 249 270 IPR001611 GO:0005515
Vra7g0986 1132 MobiDBLite consensus disorder prediction 722 744 - -
Vra7g0986 1132 SMART serkin_6 835 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0986 1132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 959 971 IPR008271 GO:0004672|GO:0006468
Vra7g0986 1132 Gene3D Phosphorylase Kinase; domain 1 795 910 - -
Vra7g0986 1132 Pfam Protein tyrosine and serine/threonine kinase 838 1116 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0986 Vra-Chr7 23817774 23821620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0986 41 1120 Receptor kinase-like Gene Family AT1G55610 49.376 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Vra7g0986 PK_Tyr_Ser-Thr 1.6e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0986 7 23817774 23821620 Vra7g0986 7 23817774 23821620 ECH