Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2083 ATGGCCTCATCCACCGGAATCTCTACCACTTCACCCTCTCAGGACGATCTCCACCTTCTCATGGAACAAAGAAGAAAGAAGAGAAAGCAGTCCAACCGTGACTCCGCCAGAAGATCAAGGATGCGAAAGCAGAAGCACTTCGATGATCTAACTGCACAGCTCAAGCTTCTTCAGAAGGAAAATGACCTTATCCTCAACCAACTCAACGTCACCACCCAACACTATCTCAAGCTCCACGCTCACAACTCCATCCTCACAGCCCAGAAGACTGAACTCGCTCAAACCCTCCACTCCTTCAATCACATCATCAAACTCATCAACGCAACAAACCATTATTATCATCACCATAACGATAACAAAGCCAATAATAATTTCATCACTCCCATGCACACGTCCTTCCTTAATCACCCCATTGTCGCCACTGCAGACAACATCTGTCTGTGGTGA 447 0.4676 MASSTGISTTSPSQDDLHLLMEQRRKKRKQSNRDSARRSRMRKQKHFDDLTAQLKLLQKENDLILNQLNVTTQHYLKLHAHNSILTAQKTELAQTLHSFNHIIKLINATNHYYHHHNDNKANNNFITPMHTSFLNHPIVATADNICLW* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2083 148 SUPERFAMILY Leucine zipper domain 24 79 IPR046347 GO:0003700|GO:0006355
Vra6g2083 148 MobiDBLite consensus disorder prediction 1 46 - -
Vra6g2083 148 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Vra6g2083 148 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 144 - -
Vra6g2083 148 Coils Coil 40 67 - -
Vra6g2083 148 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700|GO:0006355
Vra6g2083 148 Pfam bZIP transcription factor 23 80 IPR004827 GO:0003700|GO:0006355
Vra6g2083 148 MobiDBLite consensus disorder prediction 1 17 - -
Vra6g2083 148 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Vra6g2083 148 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Vra6g2083 148 PANTHER BZIP TRANSCRIPTION FACTOR 4 144 - -
Vra6g2083 148 Gene3D - 22 77 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra6g2083 bZIP_1 4.5e-10 CL0018