Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2082 ATGGGATCAGTTTGTTGTGTTGCTGCAAAGGATTCTAATCTTCCTAACAGAACTAGGGGTGAAAGCTTACGTAGAGATGTTGTGTATTCACCATCGTGGAGCTTTCAATGGGATAGTAGGGAACGTGTTACCGGTGAAATTGAGAATCCTTCTTATCACGCATCTCATTTAGACAGTAGAAATGTCAGCATGGAGTTAAAAGGTTCATTAAGCTCTGAAAGAGGTAATCTGTCTGATGGGGGAAGCATCATGGAGAATTCTGTGACTCCTATTTCTCTGAAGTCCCCTGTTGATGAGGCGCTGGTTGCAAATCTGATGACACCCTCGTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAATCCAGTGGAGTCTTCATTACCAAATCTTTCTTTTTCAATACCTTCAGTCTTCTCAACGCCCACACTAGATCCTTTGCCTAATCACAATTATAACCATCTTCCCAACTCTACCCCAACAAGATGGGCACATCGATCTCCAGCACACCCTCTCTTGAGACAGATTTCTGATAGTCGAATTATGGGTCTGAAATCGCCGGACAACTCAATTTCGGAAGGAAGGCCATCCTTTGTACTCTCTACTTGCAGCAACGAAATGGCTGCTGGATCCCTCTGTGGATCATCTGATGGATGGTCAATGCGAACCTTCTCTGAGATGGTGGCATCGTCCCAAAGGGAAAGGTGGTCTTTTGATAGTGAGTGTTTTGGCTCTGGTCGTCACAAGATAAGTGGATCCAGTAGCAGGTTCTCATATTCTCCCTCCATGGAGCTACAATCTTGTGGGGCTTGCTCAAAGCTTTTGACTGAGAGATCAACATGGAGCAACCAGAAGTTTATTGCCAGCAATGACCTCGCGGTTGTTGCGGTGTTGGTCTGTGGTCATGCATATCATGCAGAATGTTTGGAGGCTATGACACCAGAGGCAGATAGGTATGATCCAGCTTGTCCAATCTGTATGGTTGGAGAGAAGCACTTTTCAAAGTTGTCTAGAAAAGTTCTTCGGGCTGAATCAGAGATGAAGGCCAAGAACCACAAGATATCCAGAAACCGTGTAGTCGATAGCTACCTTGATGGTGGTTTTGATGTTTTTGATCGCCAAAAAGATATTGATTTGGGAGGAAAAGTTTCAAAAATGGAACCAAGTTCCAGTGCGAGGAGCTCATTTGGAAAGCCATTCTTGAGGCGGCACTTTTCACTGGGATCCAAGTGGAGCCGATCCCTGTCCGATAATGATTCTGCCAGAAAGAAAGGCTTTTGGGCAAGATATCGGAAAGATTAA 1308 0.4472 MGSVCCVAAKDSNLPNRTRGESLRRDVVYSPSWSFQWDSRERVTGEIENPSYHASHLDSRNVSMELKGSLSSERGNLSDGGSIMENSVTPISLKSPVDEALVANLMTPSSDLSMSSNFSTVVKNPVESSLPNLSFSIPSVFSTPTLDPLPNHNYNHLPNSTPTRWAHRSPAHPLLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNEMAAGSLCGSSDGWSMRTFSEMVASSQRERWSFDSECFGSGRHKISGSSSRFSYSPSMELQSCGACSKLLTERSTWSNQKFIASNDLAVVAVLVCGHAYHAECLEAMTPEADRYDPACPICMVGEKHFSKLSRKVLRAESEMKAKNHKISRNRVVDSYLDGGFDVFDRQKDIDLGGKVSKMEPSSSARSSFGKPFLRRHFSLGSKWSRSLSDNDSARKKGFWARYRKD* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2082 435 PANTHER EXPRESSED PROTEIN 1 429 - -
Vra6g2082 435 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
Vra6g2082 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 330 IPR013083 -
Vra6g2082 435 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 429 - -
Vra6g2082 435 SMART ring_2 270 328 IPR001841 -
Vra6g2082 435 SUPERFAMILY RING/U-box 269 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2082 Vra-Chr6 37408279 37412064 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2082 6 37408279 37412064 Vra6g2082 6 37408279 37412064 ECH