Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2072 ATGGCTGAAGAGGGGCAAGTCATTACTGTTAATACCGTTGACTCGTGGAAAGAACAAATCCAGAAGGGAAATGAATCCAAAAAGCTGGTTGTGGTTGATTTTACTGCTTCCTGGTGTGGTCCATGCCGTTTTATTGCCCCATATTTTGCAGAGCTTGCTCGGAGGATGTCTGATGTAATCTTCCTCAAGGTGGATGTGGATGAACTGAGTAGTGTTGCTAAGGAATGGTCCATTGAGGCTATGCCAACCTTCTTATTCTTGAAAGAAGGTGAGCTGGTAGACAAGATTGTGGGTGCTGACAAGGATAAGCTGACACAAACCGTAGAGAAGCATGCTGCTCCTGTTACTGTTGTTTGA 357 0.4482 MAEEGQVITVNTVDSWKEQIQKGNESKKLVVVDFTASWCGPCRFIAPYFAELARRMSDVIFLKVDVDELSSVAKEWSIEAMPTFLFLKEGELVDKIVGADKDKLTQTVEKHAAPVTVV* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2072 118 Pfam Thioredoxin 9 109 IPR013766 -
Vra6g2072 118 Gene3D Glutaredoxin 1 116 - -
Vra6g2072 118 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Vra6g2072 118 CDD TRX_family 18 109 - -
Vra6g2072 118 PRINTS Thioredoxin family signature 30 38 - -
Vra6g2072 118 PRINTS Thioredoxin family signature 38 47 - -
Vra6g2072 118 PRINTS Thioredoxin family signature 77 88 - -
Vra6g2072 118 PANTHER THIOREDOXIN 1 114 - -
Vra6g2072 118 PANTHER THIOREDOXIN 1 114 - -
Vra6g2072 118 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Vra6g2072 118 SUPERFAMILY Thioredoxin-like 4 114 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2072 Vra-Chr6 37329528 37330716 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2072 6 37329528 37330716 Vra6g2072 6 37329528 37330716 ECH
Vra6g2072 6 37329528 37330716 Vra5g1613 5 22565128 22566691 PCT