Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2068 ATGGTGTCTCTGATTTCGCCACCATCTTCGTCTCCGAGCATTCAATTGCGCGAAACTCGTTTCTTCTCCACGCTCTTCATTCCACCAAGGAGTGTCAGATTCCTGCAAAACACACGAAACAACGAAAATCACAAATGGAAAACGGTACGGTGCGGCGTTACCAGCGCCGGGGCGTCTCCTCCGCCGTCGTTGATGAAGGAGCCTCACAAGTTCTTCGACCACGTAATCATCACTGTTCGCGCGGGTGACGGAGGCCACGGTGCGGTGCTGAATCACAGAGAGAAGAACGAGCTGGAGCAGGGTAAAACGAAGAAGAAAGGGAAAGGCTCGTTGAAGAGGGACTTCGACGGGTCGCTCATACTGCCTACGGGAGGGCACGGAGGGGACGTGGTGATCTACGCCGACGAGGCCAAAGACACGTTGCTGGAGTTTCACAACAAGAGCAGGTATCACGCCAAGCGCGGTGGCAACGTTGGTGCGATGGGCGTTTTGACGTCGATGTTGCGCGATGGACTTGTGGCTCCCACGATGCGCATTCCTGTTCCTGTAGGTACAGTTGTGAAAAGCAAACGAGGGAAGGTGTTGGCTGATCTAGCACAACCTGGCGATGAAGTTCTTGTTGCCAGGGGAGGACAAGGAGGGATTAGCTTGTTGGAAATGCCACAGCGTCAAAGAAAAAAGATGATGGCTCTGACAACTAATGTGATGAGAGATGACTCAGACAAGATTTTAGTTCACGGTCAACCTGGAGAGGAAGTTAAGTTGGAGTTGATCCTACGAGTTGTAGCCGACGTTGGTCTGATTGGACTTCCAAATGCTGGCAAATCAACGCTTCTGGCAGCCATTACACTTGCTAAACCTGATATTGCTGATTACCCTTTTACAACATTAATGCCAAATCTTGGACGCCTAGGTGGTGATCCCAGCTTGGGGGCAGGAATGTATTCATCAGAAGCTACATTGGCAGATTTGCCTGGTCTTATTGAAGGCGCTCACTTAGGAAAGGGTCTTGGTCGTAATTTTTTGAGGCACCTCAGAAGGACCCGGCTTTTAGTCCATGTTGTTGATGCTGCCACTGAGAGTCCTGTAAATGACTACAGGACGGTCAGAGAAGAGTTGCGCATGTATAATCCTGCTTACCTTGAGAGACCGTATGTTGTAGTTTTGAATAAGATTGACCTACCAGAGGCAAAGGACAGACTTCCATCGTTGATTCAAGAAATCATGAGAATTGGCAACCGTGATGCTCAATTGTCTGATGAAACTGATACGAAGGAGAGAAAACTTGAGGACTATCCTAGACCTCTCTCTGTTGTTGGAGTCAGTGTTCTAAAGGGCATCCAGATTAATGAAATGTTAAAGGAGATAAGGTCTGCTTTAAAGAAATGCTCGGGTTCTAGTGAAACATTGATTTCTACTTGA 1422 0.4852 MVSLISPPSSSPSIQLRETRFFSTLFIPPRSVRFLQNTRNNENHKWKTVRCGVTSAGASPPPSLMKEPHKFFDHVIITVRAGDGGHGAVLNHREKNELEQGKTKKKGKGSLKRDFDGSLILPTGGHGGDVVIYADEAKDTLLEFHNKSRYHAKRGGNVGAMGVLTSMLRDGLVAPTMRIPVPVGTVVKSKRGKVLADLAQPGDEVLVARGGQGGISLLEMPQRQRKKMMALTTNVMRDDSDKILVHGQPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATESPVNDYRTVREELRMYNPAYLERPYVVVLNKIDLPEAKDRLPSLIQEIMRIGNRDAQLSDETDTKERKLEDYPRPLSVVGVSVLKGIQINEMLKEIRSALKKCSGSSETLIST* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2068 473 SUPERFAMILY Obg GTP-binding protein N-terminal domain 70 227 IPR036726 -
Vra6g2068 473 Gene3D - 262 468 IPR027417 -
Vra6g2068 473 ProSiteProfiles Obg domain profile. 69 262 IPR006169 -
Vra6g2068 473 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 263 461 IPR031167 GO:0005525
Vra6g2068 473 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 45 418 - -
Vra6g2068 473 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 428 467 - -
Vra6g2068 473 PRINTS GTP1/OBG GTP-binding protein family signature 265 285 IPR006073 GO:0005525
Vra6g2068 473 PRINTS GTP1/OBG GTP-binding protein family signature 286 304 IPR006073 GO:0005525
Vra6g2068 473 PRINTS GTP1/OBG GTP-binding protein family signature 321 336 IPR006073 GO:0005525
Vra6g2068 473 PRINTS GTP1/OBG GTP-binding protein family signature 338 356 IPR006073 GO:0005525
Vra6g2068 473 Pfam GTP1/OBG 73 260 IPR006169 -
Vra6g2068 473 ProSitePatterns GTP1/OBG family signature. 323 336 IPR006074 GO:0005525
Vra6g2068 473 Pfam 50S ribosome-binding GTPase 264 391 IPR006073 GO:0005525
Vra6g2068 473 CDD Obg 263 460 IPR031167 GO:0005525
Vra6g2068 473 Gene3D GTP1/OBG domain 70 261 IPR036726 -
Vra6g2068 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 264 462 IPR027417 -
Vra6g2068 473 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 45 418 IPR045086 GO:0003924|GO:0005525
Vra6g2068 473 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 428 467 IPR045086 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2068 Vra-Chr6 37305591 37311010 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2068 6 37305591 37311010 Vra6g2068 6 37305591 37311010 ECH