Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2064 ATGGCTGATTTAGGCTCAGCCTCTTCCAGGAGAATGTGGTGTTCCATTCCTGAAAGAATGCAGCTGCATGTGGCCATGCTGGCCTTGCAGTTTGGCTATGCTGGCTTCCATGTAGTCTCAAGGGCTGCCCTTAACATGGGTGTCAGCAAGCTTGTTTTCCCAGTCTATCGTAACATCATTGCCTTGCTTCTACTCCTTCCCTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCAGCTATCAGTTTAAACTTTGCCTGCCAGTTCTTTTTTCTGGCACTTGTTGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGGTTGGAGAACACATCTCCTACCTTCGCATCAGCAATACAGAACTCTGTCCCGGCAATTACATTCCTCATGGCAGCCATTTTCAGAATAGAGCAAGTGAGATTGAACAGAAAAGATGGGCTGGCAAAGGTGGTGGGAACCCTTTTGTGTGTAGTTGGGGCCACTGTGATCACACTTTACAAAGGTCCAACAATATACAGCCCAGCAACCCGTGTGAACAGCATGAACAGCAACACAATGACAACACCAGTGTTTGATTTTGGGACACTCTCACTGGGAGATGCAAAGGGAAAGAACTGGACCCTGGGATGCTTGTACCTGATTGGACACTGCTTGTCTTGGTCTGGTTGGCTTGTGCTGCAAGCACCAGTTCTGAAGAAGTACCCGGCTCGTCTCTCTTTCACTTCCTACACCTGTTTCTTTGGCCTCTTGCAGTTCCTGGTCATTGCTTTGGTCCTTGAAAGAGATGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTTTATATGCGGGAGTGGTGGCATCAGGTATTGCCTTCGCTGTACAAATATGGTGCATTGAAAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTCGCCATCATGGCAACCATAGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGTGTTGATTGTAGCGGGACTGTACTTTGTTTTGTGGGGTAAAAGTGAAGAGAGGAAATTTGCTAGAGAACAGCTTGCTATTGCATCCACTACTGATCACAGCATCATAAGGCCTGCAAGCCACGCCAAAGCATCACTTGCTCAGCCACTTCTTTCTTCATCAACAGAGAATGTTTGA 1179 0.4724 MADLGSASSRRMWCSIPERMQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAISLNFACQFFFLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEQVRLNRKDGLAKVVGTLLCVVGATVITLYKGPTIYSPATRVNSMNSNTMTTPVFDFGTLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSFTSYTCFFGLLQFLVIALVLERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIERGGPVFVAVYQPVQTFVVAIMATIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAREQLAIASTTDHSIIRPASHAKASLAQPLLSSSTENV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2064 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Vra6g2064 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 350 - -
Vra6g2064 392 PANTHER WAT1-RELATED PROTEIN 14 369 IPR030184 GO:0016021|GO:0022857
Vra6g2064 392 PANTHER WAT1-RELATED PROTEIN 14 369 - -
Vra6g2064 392 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020|GO:0016021
Vra6g2064 392 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2064 Vra-Chr6 37280825 37284219 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2064 6 37280825 37284219 Vra6g2064 6 37280825 37284219 ECH
Vra6g2064 6 37280825 37284219 Vra5g1618 5 22612099 22615157 PCT