Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra6g2052 | ATGGTTCTGTCTGTTGTTCTCTCTCTACCTTGTCTCGTTATCTTCATCTTCTTCTTTGTTCTCTCGCAAAGAAGAAAACTTGCAGCACCACCAGGTCCTCCATCTCTTCCTCTCATTGGCAACCTTCACCAACTCCATCACTCATCCCCACATCGCTCCCTATGGCAACTCGCCAAACGCTACGGCCCTCTCATGTCGCTGCGTCTCGCCTCCGTACAAACCCTAGTCGTTTCCTCCGCCCAAGTCGCCAAAGAAATCCTCAAAACCCATGACCTCAACTTCGCAACCAGGCCCGCCTTCGTCGGCCTCAGAAAGCTCTCTTACAACGGGCTCGACTTGGGCTTCGCGCCCTACGGCCCATGCTGGAGAGAAATGAAGAAACTCTGCATGATCCACCTCTTCAGCGCGCACCGCGTTCAGTCCTTCCGCTCCGTTCGAGAAGAAGAGGTAGCCCAAATGCTTCGGAAGCTGTCGGAGCAAGAAGCTTCGGGCACCGTCGTGAACCTAACCGAAATAGTTATGTCTTTCTCGAGTTCTCTGATATGCAGAATCGCGTTCGGAAAAAAAAAGTACGTCGACGAGTACGAGGAAGTTGTAGGGAAGGGAAAGCGGAGGAGCCGGTTGCAGGTTATGCTGAACGAGGCGCAGGCGTTGCTGACTGAGTTTTTCTTTTCGGATTATTTTCCGTTGCTGGGTTGGGTTGATTGGTTGACGGGTAAAAGGCAGCGGCTTGAGAAAACGTTCAAGGAGTTGGATGCGTTCTACGAACGAGTCATCTTGGAGCACATGGATTCTGCCATGGCTAAAGATGGTGATGATGAGAAAGAAGTGCAAGATATCATCGATATCTTTCTTCAGCTTCTTCGTGATCGTTCTCTCTCGTTTCATTTCACTCTTGACCACATAAAAGCCGTGCTCATGAACATCTTCATAGCGGGAACAGACCCTCCTTCGGCGACAATAGTTTGGGCGATGACAGCACTATTGAAGAATGGTGAAGTAATGAGAAAGGTTCAAGAAGAAGTGAGAAGTTTATTCGGTGAGAAAGATTTCATAAACGAAGACGACGTTGAAAGGCTTCCATATCTGAAAGCAGTGGTGAAGGAGACGTTGAGACTGTTTCCACCGTCGCCACTTCTGTTGCCGAGGGAAGCGATAGAGCGTTGCAGCATAGAGGGGTACGAGATTGAAGCCAAAACCTTGGTGTACGTTAACGCCTGGGCTATAGCGATGGACCCTGAGAACTGGGAAAAGCCCCAAGAGTTTTGTCCCGAGAGGTTTCTCGGGAGTGAGATGGAGTTGAAGGGGAAGGAGTTTGAGGTGCTGCCGTTTGGGAGTGGCCGGAGAATGTGTCCGGCGAAGCACATGGGAATGGTGAACGTTGAGGTCTCTCTTGCGAATCTGCTCCACACTTTTGACTGGGAAGTGGACCCAAGGAGTGACAGAGAGGAGATGTTAGGCACAGAAGTGAAACCTGGAATAACGATGCACAAGAAAACTGACCTTTACCTTGTTCCCAAGAAGAGGACAACCTAG | 1536 | 0.5007 | MVLSVVLSLPCLVIFIFFFVLSQRRKLAAPPGPPSLPLIGNLHQLHHSSPHRSLWQLAKRYGPLMSLRLASVQTLVVSSAQVAKEILKTHDLNFATRPAFVGLRKLSYNGLDLGFAPYGPCWREMKKLCMIHLFSAHRVQSFRSVREEEVAQMLRKLSEQEASGTVVNLTEIVMSFSSSLICRIAFGKKKYVDEYEEVVGKGKRRSRLQVMLNEAQALLTEFFFSDYFPLLGWVDWLTGKRQRLEKTFKELDAFYERVILEHMDSAMAKDGDDEKEVQDIIDIFLQLLRDRSLSFHFTLDHIKAVLMNIFIAGTDPPSATIVWAMTALLKNGEVMRKVQEEVRSLFGEKDFINEDDVERLPYLKAVVKETLRLFPPSPLLLPREAIERCSIEGYEIEAKTLVYVNAWAIAMDPENWEKPQEFCPERFLGSEMELKGKEFEVLPFGSGRRMCPAKHMGMVNVEVSLANLLHTFDWEVDPRSDREEMLGTEVKPGITMHKKTDLYLVPKKRTT* | 512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra6g2052 | 511 | Pfam | Cytochrome P450 | 30 | 502 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PANTHER | CYTOCHROME P450 83B1 | 9 | 508 | - | - | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 82 | 103 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | SUPERFAMILY | Cytochrome P450 | 30 | 509 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Vra6g2052 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506|GO:0016705 | |
| Vra6g2052 | 511 | PANTHER | CYTOCHROME P450 71B11-RELATED | 9 | 508 | - | - | |
| Vra6g2052 | 511 | Gene3D | Cytochrome P450 | 22 | 511 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra6g2052 | Vra-Chr6 | 37153222 | 37156233 | Wgd |
Event-related genes