Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2050 ATGGGTTCAGTTTCTCTGAAAATTGGAGATGGAACAGCCAGATTCCAAAGAGCAACACTGTGTTCTTCAGCTGTTAATATTCTCATGATTTTCTCTGTCATAACCACCAATCTCTTTGCTCTCTACGCCTTCACTGCTTCCCCTAAACATCCCCATCACCTTCTCCACCATCATGCTCACAAGAACATTTCTCTAATCTCGGAGCAGGTCTCACTCATTCTCAGGGAGATCGATTTGTCCCAGAAGAAACTGGCCCAGATGGAGAAAGACCTTCTGGGCTACGAAAGCATTGATCTTTCACGGCCCAACATTGCATCCGAGCTCAAACTCTTCCTCCAGCGCCACGAGCTCCCTCTGGGAAAAGACTCAAGAACTGGGATCACTGAGATGGTGCCATCTGTGGGTCACACATGTGAGAAAAATTCGGACCTGCTGTCTCAGTTCATGAGTTACAAGGTTTTCGGAGCTTGCCCTGATGATTGGAGTGTGGCGCAGAAGCTGATCTTAAGAGGGTGTGAGCCTTTGCCTAGGAGGAGGTGTTTTGCAAAGACTGTTTCCAAGTTAGGTTTGTACCCCTTTCCAGATTCTCTTTGGAAGCCTGTTGGTAATAAGACTGTTAACTGGAGTGGTCTTGGTTGTAAGAACTTTGAGTGTTTGAATAGTAAGAAGTTGAGTAGGGAGTGCATTGGTTGCTTTGATTTGGTCCATGGCAATGAGAATGCTAAGTTTGTCAAGGGTAAGAGTAAGAACGATTTTCTGGTTGATGATGTGTTGGCCTTGGGAGGTGGAGGGGTTAGAATAGGGCTTGACATTGGTGGAGGGTCTGGTTCCTTTGCTGCTAGAATGGCTGATAGGAATGTTACTGTGGTTACCAACACTCTCAATGTTGATGCCCCATTCAGTGAATTCATTGCTGCAAGAGGGCTTTTTCCTCTTTACTTGAGCTTGGATCATAGGTTTCCTTTCTATGACAATGTGTTTGACTTGGTTCATGGTTCAAGCAGCTTGGATGTTGGAGGGAAGAGTGAGAAATTGGAGTTTCTGATGTTTGACATTGATAGAGTTTTGAGGGCAGGTGGTTTGTTCTGGCTGGATAACTTCTTTTGTGCAAATGAAGAAAAGAAGCAATCTTTGACTCGGTTGATTGAAAGATTTGGATATAAAAAGTTGAAATGGGTTGTGGGAGAGAAGATTGATAGTGTTGGGTCTGGCAAACCTGAGGTTGTGTTATCTGCAGTCCTTCAGAAACCTGTTAGAGTTTAG 1263 0.445 MGSVSLKIGDGTARFQRATLCSSAVNILMIFSVITTNLFALYAFTASPKHPHHLLHHHAHKNISLISEQVSLILREIDLSQKKLAQMEKDLLGYESIDLSRPNIASELKLFLQRHELPLGKDSRTGITEMVPSVGHTCEKNSDLLSQFMSYKVFGACPDDWSVAQKLILRGCEPLPRRRCFAKTVSKLGLYPFPDSLWKPVGNKTVNWSGLGCKNFECLNSKKLSRECIGCFDLVHGNENAKFVKGKSKNDFLVDDVLALGGGGVRIGLDIGGGSGSFAARMADRNVTVVTNTLNVDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVHGSSSLDVGGKSEKLEFLMFDIDRVLRAGGLFWLDNFFCANEEKKQSLTRLIERFGYKKLKWVVGEKIDSVGSGKPEVVLSAVLQKPVRV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2050 420 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 261 388 IPR004159 GO:0008168
Vra6g2050 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 420 - -
Vra6g2050 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 249 387 IPR029063 -
Vra6g2050 420 Gene3D Vaccinia Virus protein VP39 247 401 IPR029063 -
Vra6g2050 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2050 Vra-Chr6 37091293 37093022 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2050 6 37091293 37093022 Vra6g2050 6 37091293 37093022 ECH
Vra6g2050 6 37091293 37093022 Vra5g1640 5 22819578 22821091 PCT