Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2046 ATGGACCGACGCTGGCCATGGAAGAAAAAATCGTCGGACAAGGCTGTGATGGAGAAAGCAGCTGCAGAATTGGACTCTGCTGCGGATGCTGCCAATCAGCCGAGCTACGTCCAAATCTCAGTAGAGTCATATTCTCATCTGACTGGTTTGGAGGATCAAGTGAAGGCATATGAAGAAAAAGTTCAGACACTGGAGGATGATATCAAGAAATTAAATGAAAAACTGTCTGCAGCTAATTCGGAGATAAATACAAAGGAAAGCCTGGTAAAACAGCATGCTAAAGTAGCAGAAGAGGCTGTCTCAGGCTGGGAAAAGGCTGAAGCAGAAGCTTTAGCTTTGAAGAACCATCTGGAGTCTGTCACTCTTGCAAAACTCACTGCTGAGGATCAGGCGTCACAGTTAGATGGTGCGCTTAAAGAGTGTATGCGACAGATAAGAAACCTAAAGGAAGAACATGAACAGAAATTACAGGAAGTTTCTCTCACAAAAACCAAGCAATTGGACAAGATTAAGGGTGAGCTAGAGGCTAAGATAGCAAGCTTTGAACAGGAACTCCTCAGGTCTGCTTCCGACAATGCGGCTCTGTCAAGGTCCTTGCAAGAGCGTTCTAACATGATAATCAATTTAAGGGAAGAAAAAGCTCACGCTGAGGCTGAAATTGAGCTTCTTAAGGGAAACATCGAATCATGTGAAAGAGAAATCAATTCACTCAAATATGAGGTTCATGTTATTGCCAAAGAGCTTGAGATTCGCAATGAAGAAAAGAATATGAGCATGAGGTCTGCAGAAGCTGCTAACAAGCAGCACATGGAGGGTGTTAAAAAAATTGCTAAATTGGAAGCAGAGTGCCAAAGATTACGTGGTCTTGTGCGGAAGAAATTACCTGGTCCAGCTGCACTTGCACAAATGAAGCTAGAAGTCGAAAGTCTTGGTCGAGAATACGGAGAAACTCGATTAAGGAAGTCTCCTGTCAAACCCCCTGGTTCTCACATGTCTCCTATGCCTGGGTTTTCCCTAGATAATGCTCAGAAATTCCACAAAGATAATGAATTTCTTACTGAGCGTTTGCTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAATAGTGAACTGCAGGCTTCAAGGAGTATGTTTGCGAAAACTTTGAGCAAACTTCAAAGTTTGGAAGCACAGGTTCAGACAAGTAATCAGCAGAAGGGATCTCCTAAATCCATCATAAATGAAAGCATTTACAGTCAAAATGCAAGCAATGCACCAAGCTTCATCTCCATGTCTGAAGATGGAAATGATGATGTGGGAAGTTGTGCCGAGTCTTGGTCTACAGCAGTTCTCTCTGATCTTTCCCAATTCCCTAAAGGAAAGAATACTGAGGAATTGAGCATATCTGATACCACTAAGAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAATTGGCTCGATTATCAAATGACTGCGGTGAAGTTTCAGGTTCTTCAAACAATATAGCAAACGAAGCTGTGACCGATGAAATATCAGAATTCAGCACTGGGAAAGATGTTCCCTCTGACTCCCAAGAGAATAGTGATCCAAATCCACTGCCAAGTGAGGTGTCTTCTGCTGAGGAGTTATCAGCACCTCATCCCCAATCTGACGTTCCTGGCTTGTCGCTACCAGAGCTTCAATCAAGAATATTATCAGTTTTCGAATCCATGACTAAGGATGCTGATATGGAGAAGATATTGAAGGATATTAAACACGTTCTTGAAGATGCATATGGCGTTTCAATCCAGGACTCTGTATCTGCCGTTCCCCATGATGTCACGCCTTCTGATATCACGTGTGATAAGCAGGGTAGCGCTGAAGATGTTGCCTTAAATGCGGAGAAAGAAGTTATTTCATCCCAGCAACCTCCAGAGTATGTGCAGATAACTGCGGATCTAGAAGCCGCAATGTCTCAAATTCATGACTTTGTATTGCTCCTCGCCAAAGAAGCAATGGCAGCGCATGATATATCTTCTGATGGAGATGGAATAAGCCAAAAGATGCAGGAGTTCTCTGTCACTTTTAATAAGGTTACCTCCAATGAAGAAAATTTGCCACAGTTTGTTCTGGACCTGTCTAGTGTTCTAGCCAAAGCAAGTGAATTCAGATTTAACATTCTCGGTTACAAGGGTACGGAAGCAGAAACCAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCAGAAAATAAGTTAGTTCAAGACGATTCATCCGGGGAGAGATATCAAAATGGTCACTCCCATATTCTTAATCCCTGTTCTGATCCTGAAATTCCTGATGATGGAAATTTGGCCTCAGGCTATGAATCAAATGCCACGCAGAAGTTCTCAATGGAGGAGTTTGAAGAATTGAGGTTAGAGAAAGAGAAGGCAATTGCGGATCTATCAAAATGTGCTGAAAATCTTGAACAGACAAAGTCTCGGTTACTAGAGACAGAGCAACATCTAGCTGAAGTTAAATCACAGATGGCTTCTGCTCAAAGAGCAAATAGCTTAGCTGAGACACAGCTAAAATGTATGACAGAATCGTACAGGTCAATTGAAACACGTGCAAGGGAGTTTGAGACTGAGCTTATTCATCTGCGAATGAAGACAACAACTCTGGAGAATGAACTGGAAGATGAAAAGAAGGCTCATGAAGCAGCTTTGGCCAAACACAAGGAGCTAGAAGAACAACTACAAAGGATTGAGAGCTCAGCGGCTGATAATGACATAAAGGCTAAGCAGGAGAGAGACTTGACAGCCGCTGCTGAAAAGCTAGCCGAGTGTCAGGAAACCATATTTCTTCTTGGCAAGCAGTTAAAAGCTCTGCATCCTCAAACAGAGCCAATGGAATCTCCATATTCAAAGGCTGAAAACTTCACGGAGCGTGAACCTAATAGCCCAAGTTTGCAAGATCAAGCAGAGATGGACAGTGCTACTTCTACATTTGTGCAAAGATTGGGTGGAGATTCCCCTTTACATTTTAGCAACAGTTTATATAGTCCATCAGATAACGAGACAATCTTTCCAGCCATATCTTCTGTACAGAATCCAAACCAAAGGCCTACCAAGTCAACCTCATCATCAGCCTCTTCCACTCCAACACCAGAAAAACACACCCGAGGTTTTAGTAGGTTCTTTTCTTCAAAAGGTAAAAACGGTCATTGA 3195 0.4263 MDRRWPWKKKSSDKAVMEKAAAELDSAADAANQPSYVQISVESYSHLTGLEDQVKAYEEKVQTLEDDIKKLNEKLSAANSEINTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLAKLTAEDQASQLDGALKECMRQIRNLKEEHEQKLQEVSLTKTKQLDKIKGELEAKIASFEQELLRSASDNAALSRSLQERSNMIINLREEKAHAEAEIELLKGNIESCEREINSLKYEVHVIAKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGREYGETRLRKSPVKPPGSHMSPMPGFSLDNAQKFHKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMFAKTLSKLQSLEAQVQTSNQQKGSPKSIINESIYSQNASNAPSFISMSEDGNDDVGSCAESWSTAVLSDLSQFPKGKNTEELSISDTTKKLELMDDFLEVEKLARLSNDCGEVSGSSNNIANEAVTDEISEFSTGKDVPSDSQENSDPNPLPSEVSSAEELSAPHPQSDVPGLSLPELQSRILSVFESMTKDADMEKILKDIKHVLEDAYGVSIQDSVSAVPHDVTPSDITCDKQGSAEDVALNAEKEVISSQQPPEYVQITADLEAAMSQIHDFVLLLAKEAMAAHDISSDGDGISQKMQEFSVTFNKVTSNEENLPQFVLDLSSVLAKASEFRFNILGYKGTEAETNSPDCIDKIALPENKLVQDDSSGERYQNGHSHILNPCSDPEIPDDGNLASGYESNATQKFSMEEFEELRLEKEKAIADLSKCAENLEQTKSRLLETEQHLAEVKSQMASAQRANSLAETQLKCMTESYRSIETRAREFETELIHLRMKTTTLENELEDEKKAHEAALAKHKELEEQLQRIESSAADNDIKAKQERDLTAAAEKLAECQETIFLLGKQLKALHPQTEPMESPYSKAENFTEREPNSPSLQDQAEMDSATSTFVQRLGGDSPLHFSNSLYSPSDNETIFPAISSVQNPNQRPTKSTSSSASSTPTPEKHTRGFSRFFSSKGKNGH* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2046 1064 Coils Coil 47 88 - -
Vra6g2046 1064 Coils Coil 131 184 - -
Vra6g2046 1064 Coils Coil 342 369 - -
Vra6g2046 1064 MobiDBLite consensus disorder prediction 495 546 - -
Vra6g2046 1064 MobiDBLite consensus disorder prediction 1018 1064 - -
Vra6g2046 1064 Coils Coil 880 941 - -
Vra6g2046 1064 Coils Coil 245 282 - -
Vra6g2046 1064 SUPERFAMILY Tropomyosin 795 966 - -
Vra6g2046 1064 MobiDBLite consensus disorder prediction 495 557 - -
Vra6g2046 1064 Coils Coil 796 851 - -
Vra6g2046 1064 MobiDBLite consensus disorder prediction 1018 1048 - -
Vra6g2046 1064 MobiDBLite consensus disorder prediction 968 987 - -
Vra6g2046 1064 MobiDBLite consensus disorder prediction 953 987 - -
Vra6g2046 1064 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1064 - -
Vra6g2046 1064 Coils Coil 199 240 - -
Vra6g2046 1064 Pfam Filament-like plant protein, long coiled-coil 85 959 IPR008587 -
Vra6g2046 1064 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1064 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2046 Vra-Chr6 37007016 37013189 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2046 6 37007016 37013189 Vra6g2046 6 37007016 37013189 ECH
Vra6g2046 6 37007016 37013189 Vra5g1642 5 22836180 22841969 PCT