Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2043 ATGATGACCCATATCCCTATTGCAGAATTGGGTTTAGGGTTTCAATTTCAAGCAAATAGAAAGAGATTATTTTTCTCTTACACACTCCAAACCTCACTGCTTTGTGCTGCATTCCTTTGCCTTGCTCCCACAGAAGAATTAACATACATAGCAAGCATGGCAGTCACATTCTACGACCTTACTTCTACCTCTGGGTTGAAGAAGCTTGACGAGTACCTTCTCTCACGCAGTTACATCACAGGGTACCAAGCTTCAAAGGATGATCTCACTGTCTATGCAGCTTTGCCAACTGCTCCATCATCAGAGTATGTGAATGTGTCCAGGTGGTTCAAGCACATTTATGCGTTGTTGAGAATTTCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTTGAGGGATCTCTTGTTGCCGAGCCTGTTGCAACTCCCCCAGCTGCTGATACAAAGGCTGCTGCAGCTGAGGATGACGATGATGATGATGTCGATTTGTTTGGTGAAGAGACAGAGGAAGAAAAGAAGGCAGCTGAGGAACGGGCAGCTGCAGTGAAGGCATCTGGAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGACGTGAAACCATGGGACGATGAAACCGACATGAAGAAGCTCGAAGAAGCAGTGAGATCTGTTAGCATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGTTCCAGTTGGGTATGGCATCAAGAAACTGCAAATTATGCTTACTATTGTGGATGACCTAGTTTCTGTTGACAATCTTATTGAGGAATATCTCACCGTTGAGCCCATCAGTGAATATGTCCAGAGTTGTGACATTGTAGCCTTCAATAAAATTTAA 849 0.4441 MMTHIPIAELGLGFQFQANRKRLFFSYTLQTSLLCAAFLCLAPTEELTYIASMAVTFYDLTSTSGLKKLDEYLLSRSYITGYQASKDDLTVYAALPTAPSSEYVNVSRWFKHIYALLRISGVSGEGSGVTVEGSLVAEPVATPPAADTKAAAAEDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVSMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPISEYVQSCDIVAFNKI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2043 282 MobiDBLite consensus disorder prediction 167 187 - -
Vra6g2043 282 MobiDBLite consensus disorder prediction 138 187 - -
Vra6g2043 282 MobiDBLite consensus disorder prediction 152 166 - -
Vra6g2043 282 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 157 165 IPR001326 GO:0003746|GO:0005853|GO:0006414
Vra6g2043 282 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 53 282 - -
Vra6g2043 282 SUPERFAMILY eEF-1beta-like 190 282 IPR036219 -
Vra6g2043 282 PANTHER ELONGATION FACTOR 1-DELTA 1-RELATED 53 282 - -
Vra6g2043 282 Pfam EF-1 guanine nucleotide exchange domain 195 282 IPR014038 GO:0003746|GO:0006414
Vra6g2043 282 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 271 282 IPR001326 GO:0003746|GO:0005853|GO:0006414
Vra6g2043 282 Gene3D - 46 130 - -
Vra6g2043 282 Gene3D - 186 282 IPR014717 -
Vra6g2043 282 Coils Coil 165 185 - -
Vra6g2043 282 SMART EF1_GNE_2 193 282 IPR014038 GO:0003746|GO:0006414
Vra6g2043 282 SUPERFAMILY GST C-terminal domain-like 44 120 IPR036282 -
Vra6g2043 282 CDD EF1B 191 282 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2043 Vra-Chr6 36977023 36979194 Dispersed