Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2018 ATGTTTCCTTTTATGAACTTTCCTCTTTCTTTTTCTTTTTCTTCTTCTTCTCCTTCTTCACTCTTCCGTTTCATAGTATTATTTATAATAACAGTTTTGATTGTGTGTGAAAAAACAAGGGCAGTCGTGAAACTGCCACCAAATGTTTCAGTTCCTGCAGTGTTGGTGTTTGGAGATTCGATCATGGACACTGGCAACAACAACAACAATTTAGCAACAACAGCAAGGAGTAATTACCCACCATATGGTAAAGATTTTAAGGGAGGGATCCCTACTGGAAGATTCAGTAATGGAAAGGTTCCATCTGACCTTATAGTTGAAGAACTGGGAATAAAAGAGCTTCTGCCACCGTACGTCGATTCAAAGCTTGAACCTGGTGAATTGGCGACTGGTGTGTGCTTTGCATCTGGTGGCGCAGGATACGACCCTTTAACAGCACAAACATCGATTACCATATCATTATCGGGTCAACTAGGGTTGTTCAGAGAATACATAGGGAAGTTGAAAGCGGTGGTCGGAGAAGAGAGGACCAAGTTCATCTTAAAAAACACTCTTTATATTGTGGTATTAGGAAGCAACGACATTTCCAACACATACTTTTTGACCCGTGTTAGACAACTGCAGTACCCTAATTTTTCTGCATATGCTGATTTTATGCTCTCCTCAGCTTCTACTTTCCTCAAGGAAATTTATGGAGAAGGAGCACGGAGGATTGCAGTGTTCAGTGTGCCGCCACTTGGGTACTTGCCATCTCAGAGAACCGTCGGAGGAGGAATACGAAGAGACGTTGTAGTGAAGATAAACGACGCCGTACAGATCTTTAACACCAAATTGTCAAAGCAACTCGAGTCTCTTAATCACAACCTTCCAGATAGCAGAATGGTGTACATTGATGTTTACAATCCTCTCATGGACATCATAGTCAACTACCAAAAATATGGGTATAAAGTGGGAGACAGGGGGTGTTGTGGCACAGGGAAAATAGAAGTGGTATTTCTATGCAATCGTTTCACTCCATTATGCTCTAACGATTTGGAGTACGTGTTTTGGGACAGTTTTCATCCAACTGAAAGTGTTTATAAAAAGCTTATAAGCCCTATTATTGGAAAATATTTGAACAAGTTCTTGTGA 1131 0.4076 MFPFMNFPLSFSFSSSSPSSLFRFIVLFIITVLIVCEKTRAVVKLPPNVSVPAVLVFGDSIMDTGNNNNNLATTARSNYPPYGKDFKGGIPTGRFSNGKVPSDLIVEELGIKELLPPYVDSKLEPGELATGVCFASGGAGYDPLTAQTSITISLSGQLGLFREYIGKLKAVVGEERTKFILKNTLYIVVLGSNDISNTYFLTRVRQLQYPNFSAYADFMLSSASTFLKEIYGEGARRIAVFSVPPLGYLPSQRTVGGGIRRDVVVKINDAVQIFNTKLSKQLESLNHNLPDSRMVYIDVYNPLMDIIVNYQKYGYKVGDRGCCGTGKIEVVFLCNRFTPLCSNDLEYVFWDSFHPTESVYKKLISPIIGKYLNKFL* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2018 376 SUPERFAMILY SGNH hydrolase 54 369 - -
Vra6g2018 376 Gene3D SGNH hydrolase 44 371 IPR036514 -
Vra6g2018 376 PANTHER GDSL ESTERASE/LIPASE EXL3 22 369 - -
Vra6g2018 376 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 22 369 - -
Vra6g2018 376 Pfam GDSL-like Lipase/Acylhydrolase 54 365 IPR001087 GO:0016788
Vra6g2018 376 CDD SGNH_plant_lipase_like 52 361 IPR035669 -
Vra6g2018 376 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 54 65 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2018 Vra-Chr6 36780986 36783617 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2018 6 36780986 36783617 Vra6g2018 6 36780986 36783617 ECH
Vra5g1668 5 23054463 23058077 Vra6g2018 6 36780986 36783617 PCT