Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2017 ATGAAGATCCCTCTTTCTTCTTCAACCTTTAACTCAGTTTTGATTCTGTCAGTGATTTTCTTAGTTGATATCTGCAAAACATGTGAGTCTGCAAAACTTTCAGTTCCTGCAGTGTTGGTGTTTGGAGATTCGATCGTGGACACTGGCAACAACAACAAGATTTTGGCAACATCAGCAAGGTGCAATTTCCCACCATATGGTAAAGATTTTGAGGGAGGGATTCCTACTGGTAGATTTTCCAATGGAAAGGTTCCATCAGACTTCATAGCTGAAGAATTGGGCGTAAAAGAGTTTCTTCCAGCATACTTGGATCCTAATCTCCAACCTGATGAATTAGCCACTGGTGTTTGCTTTGCATCTGGTGGTGCAGGATACGATCCTTTAACATCACAAACTGCAGGAGCTATAACACTATCTAGTCAACTACAAATGTTCAAAGAATACATAGTCAAGCTAAATCAACACGTTGGAGAGAACAGAACAAACTTCATCCTAAGCAACGCTCTTTTCTTTGTCGTCTTAGGCACCAACGACATTTCCAACACCTACTTTTTGTCCCATCTCAGACAACTGCAATACGATGTTCCTGCTTACTCTGACTTCCTTGTTAACTCAGCTTCTGATTTCTTCAAGGAAATATATGAACTAGGAGTACGAAAGATTGGAGTATTAAGTGGGCCACCAGTTGGGTGTGTGCCATATCACAGAACATTGTCTGGTGGAATAGAAAGAAAGTGCATACAAAGGTACAACGATGCAATGATGTTATTTAACGATAAATTATCGAAGGAGATACGTTCCCTCAATCAGAAACTTCCAAACAGTAGGATCGTTTACATGGATGTCTACCACCCTTTACTTGATATCTTTGTGAATCCCCAAAAATATGGGTACAAAGTCGGAGACAGAGGATGTTGTGGCACAGGTACTCTAGAGGTTGCATTGACATGCAACCGTTTGGATGCCACGTGTCCTAATGTTTTGGAGTATGTGTTTTGGGACGGTTTTCACCCTACTGAAAGCGTTTACAAAAAGCTTGTGCCCATTATTGTGCAGAAACATATGCACCAGTTTCAGTGA 1080 0.4093 MKIPLSSSTFNSVLILSVIFLVDICKTCESAKLSVPAVLVFGDSIVDTGNNNKILATSARCNFPPYGKDFEGGIPTGRFSNGKVPSDFIAEELGVKEFLPAYLDPNLQPDELATGVCFASGGAGYDPLTSQTAGAITLSSQLQMFKEYIVKLNQHVGENRTNFILSNALFFVVLGTNDISNTYFLSHLRQLQYDVPAYSDFLVNSASDFFKEIYELGVRKIGVLSGPPVGCVPYHRTLSGGIERKCIQRYNDAMMLFNDKLSKEIRSLNQKLPNSRIVYMDVYHPLLDIFVNPQKYGYKVGDRGCCGTGTLEVALTCNRLDATCPNVLEYVFWDGFHPTESVYKKLVPIIVQKHMHQFQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2017 359 CDD SGNH_plant_lipase_like 36 353 IPR035669 -
Vra6g2017 359 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 38 49 IPR008265 GO:0006629|GO:0016298
Vra6g2017 359 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 29 357 - -
Vra6g2017 359 PANTHER GDSL ESTERASE/LIPASE EXL3 29 357 - -
Vra6g2017 359 Pfam GDSL-like Lipase/Acylhydrolase 38 346 IPR001087 GO:0016788
Vra6g2017 359 Gene3D SGNH hydrolase 25 354 IPR036514 -
Vra6g2017 359 SUPERFAMILY SGNH hydrolase 37 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2017 Vra-Chr6 36775092 36778393 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2017 6 36775092 36778393 Vra6g2017 6 36775092 36778393 ECH
Vra6g2017 6 36775092 36778393 Vra5g1667 5 23041794 23047090 PCT
Vra5g1669 5 23067270 23068893 Vra6g2017 6 36775092 36778393 PCT