Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g2012 ATGACTACAACAACAGCCAATCACACAGTAACCGTATCTGGGTGGGCAGCACATGATACTTCGGGCAAGATTACCCCCTACACCTTCAAAAGAAGGGAGAACGGTGTTAACGATGTTACCATAAAGATATTGTACTGTGGAATCTGCCACACGGACCTCCACTATGCTAAAGATGAATGGGGCATCACCAAGTACCCTGTGGTACCTGGGCACGAAATCATCGGGGTGATAACTAAGACAGGAAGCGATGTGCAGGGGTTCAAGGAAGGAGACAGAGTAGGTGTGGGGTGTATGGCGGCTTCGTGCTTGGATTGTGAACACTGCAAGACAGATCAGGAAAACTACTGTGATAAGATGGTGCTTATATACAACGGAATCTTCTGGGATGGAAGCATCACCTATGGTGGTTACTCCCAGCTCATTGTTGCAGATTACAGGTATGTGGTACACATTCCGGAGAGCCTACCGATGGATGCGGCGGCTCCTCTACTGTGCGCAGGAATAACAGTGTTCACTCCTTTGAAAGATCACGATTTGGTGGCAACGCCGGGGAAAAAGATTGGGGTGGTGGGTTTGGGAGGGCTGGGACACTTGGCCGTTAAATTTGGGAAGGCATTCGGGCACCATGTTACCGTTATAAGTACTTCTCCTTCCAAAGAAGCTGAAGCGAAGCAACGTTTGGGTGCTGATGATTTCATAATCAGCTCCAACCCTAAACAATTACAGGATGCAAAGAGAAGCCTCGATTTCATACTGGACACTGTTTCTGGAGACCACCCTCTGTTACCCATCTTGGAATTGCTGAAAGTAAGCGGCACCTTATTTCTGGTGGGAGCTCCGGACAAGCCCCTCCAACTGCCGGCTTTCCCGTTGATTTTTGGAAAGAGAGCCGTAAAAGGTGGCATCATAGGAGGAATAAAAGAGACACAGGAAATGTTGGATCTGTGTGCGAAGTACAACATAACGAGTGACATTGAGGTAATCACACCAGACAAAATCAACGAGGCTATCGATCGTCTTGCGAAGAATGATGTTCGGTACCGTTTCGTGATTGACATTGGTGCTGCCTCCAGCGTGTAG 1080 0.4824 MTTTTANHTVTVSGWAAHDTSGKITPYTFKRRENGVNDVTIKILYCGICHTDLHYAKDEWGITKYPVVPGHEIIGVITKTGSDVQGFKEGDRVGVGCMAASCLDCEHCKTDQENYCDKMVLIYNGIFWDGSITYGGYSQLIVADYRYVVHIPESLPMDAAAPLLCAGITVFTPLKDHDLVATPGKKIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEAEAKQRLGADDFIISSNPKQLQDAKRSLDFILDTVSGDHPLLPILELLKVSGTLFLVGAPDKPLQLPAFPLIFGKRAVKGGIIGGIKETQEMLDLCAKYNITSDIEVITPDKINEAIDRLAKNDVRYRFVIDIGAASSV* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g2012 359 Gene3D - 166 323 - -
Vra6g2012 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 2 355 - -
Vra6g2012 359 PANTHER ALDEHYDE REDUCTASE 2 355 - -
Vra6g2012 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Vra6g2012 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Vra6g2012 359 SUPERFAMILY GroES-like 18 177 IPR011032 -
Vra6g2012 359 Gene3D - 15 353 - -
Vra6g2012 359 CDD CAD1 14 352 - -
Vra6g2012 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Vra6g2012 359 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Vra6g2012 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g2012 Vra-Chr6 36739938 36741772 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2012 6 36739938 36741772 Vra6g2012 6 36739938 36741772 ECH