Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1985 ATGCAGTTGAGCGAGACGGAAGGGATAGAGGGGAAGACCTTTGTGGTGACGGGTGGACTCGGATTCGTAGGCTCTGCTCTCTGCTTGGAGCTCATCCGAAGAGATGCCAGAGAGGTTCGAGCATTTGACCTCCGCCCCTCTTCTCCTTTTTCCCTTGCTCTCCACGATAAGGGAGTCCTCTGCATCCAAGGTGACGTTCGCCGCAAAGAAGACGTGGAAAAGGCCCTCCGCGGTGCCGATTGTGTTTTCCACCTTGCGGCCTTTGGAATGTCAGGTAAAGAGATGCTTCAGTTTGGTCGTGTTGATGAAGTCAACATAAATGGGACCTGCCATGTTCTCGACGCTTGTCTCGACCTCGGCATCACGAGGCTTGTCTACTGTAGCACATACAATGTTGTTTTCGGTGGTCAACAGATCATCAACGGGAATGAGACATTGCCTTATTTCCCAATTGATCAACATGCCGATCCATATGGCCGTAGTAAATCAATCGCTGAGCAGTTGGTTCTAAAGAACAATGCCCGCCCTCTCAAGAACAAATCCGGAAATCTTTATACCTGTGCTCTTCGTCCGGCTGCAATCTATGGTCCGGCCGAAGACAGGCATCTTCCAAGGATCGTAACCATGGCAAAGATGGGTCTCCTTTTGTTCAGAATTGGCGACCAAACTGTAAAATCAGATTGGCTTTTTGTGGATAACCTTGTCCTTGCTCTTATATTGGCCAGCATGGGACTTCTTGATGACATTCCCAGCCAGGCAAAACGCCGTGTAGCTGCTGGCCAGGCCTACTTTATATCTGATGGTTCACCGGTCAATTCTTTTGAATTCCTACAGCCTCTACTTAGGAGTTTAGATTATGAGCTACCACAGACTACCCTAACTGTGGATCGGGCTCTTGCTCTTGGTAGGATTTGCTCCGCTGTTTATACAATCCTATATCCATTGCTCAATCGGTGGTGGCTTCCGCAGCCGTTCATTCTTCCCAGTGAAGTACACAAGGTGGGGGTCACCCATTATTTCTCCTATCTCAAAGCCAAACAGGAGATTGGCTATGTTCCCATGGTTTCCTCACGTGAGGGGATGGCTCTGACCATATCTTACTGGCAACAGAGGAAAAGAGCGACTCTGGATGGACCCACGATATTCGCCTGGTTGTTTTGCGTCATTGGAATGATCTCACTCTTTTGCGGTGCTTTCTTACCTGACATAGGGATCTTGTTCTTTCTCAGAGCTACATGTCTATTTGTCTTTCGATCAATGTTGGTGACAAGGCTGGTGTTTCTTCTGGCTACAACTGCACATATTGCTGAGGCCATTTATGCTTGGCACCTGGCTCAAAGGGTAGATCCTTCCAATGCAATAGGATGGTTTTGGCAAACTTTTGCTCTTGGCTTTTTTTCGTTGCGCCTCCTTTTGAAAAGAGCAAGAACATAA 1434 0.4805 MQLSETEGIEGKTFVVTGGLGFVGSALCLELIRRDAREVRAFDLRPSSPFSLALHDKGVLCIQGDVRRKEDVEKALRGADCVFHLAAFGMSGKEMLQFGRVDEVNINGTCHVLDACLDLGITRLVYCSTYNVVFGGQQIINGNETLPYFPIDQHADPYGRSKSIAEQLVLKNNARPLKNKSGNLYTCALRPAAIYGPAEDRHLPRIVTMAKMGLLLFRIGDQTVKSDWLFVDNLVLALILASMGLLDDIPSQAKRRVAAGQAYFISDGSPVNSFEFLQPLLRSLDYELPQTTLTVDRALALGRICSAVYTILYPLLNRWWLPQPFILPSEVHKVGVTHYFSYLKAKQEIGYVPMVSSREGMALTISYWQQRKRATLDGPTIFAWLFCVIGMISLFCGAFLPDIGILFFLRATCLFVFRSMLVTRLVFLLATTAHIAEAIYAWHLAQRVDPSNAIGWFWQTFALGFFSLRLLLKRART* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1985 477 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 9 360 - -
Vra6g1985 477 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 373 IPR036291 -
Vra6g1985 477 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 292 IPR002225 GO:0003854|GO:0006694|GO:0016616
Vra6g1985 477 Pfam Transmembrane protein 254 386 472 IPR028110 -
Vra6g1985 477 Gene3D - 3 374 - -
Vra6g1985 477 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1985 Vra-Chr6 36550656 36552797 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1985 6 36550656 36552797 Vra5g1701 5 23303332 23307124 PCT