Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1983 ATGGAGAAGGCAGGAGTTCTATCGGCGAAGGAGGCATTCGAGAAGCTTGAAAAGGTTGGAGAAGGAACGTACGGAAAGGTGTACAGGGCAAGAGAAAAGGCCACTGGGAAGATCGTTGCCCTTAAGAAGACTCGCCTCCATGAGGACGAAGAAGGTGTCCCTCCCACCACCCTCCGCGAGGTTTCAATTCTTCGGATGCTCTCTCGCGATCCCCATGTCGTCAGGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGCAAGACTGTCCTCTACTTGGTATTTGAGTACATGGATACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAGACCGGAGATTCCATTCCCCCTCAAACCATCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCACGGCCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGGAAAACAATGATGCTTAAAATAGCTGATCTTGGGCTCGCTCGAGCATTTACTGTGCCGATTAAGAAATATACTCATGAGATACTTACCCTGTGGTATAGAGCCCCTGAAGTTCTTTTGGGAGCCACCTATTACTCAATGGCTGTGGACATATGGTCCGTTGCCTGCATATTTGCCGAACTTGTCACCAAACAAGCACTCTTTCCTGGTGATTCCGAGCTTCAACAACTCCTTCATATATTCAGGCTATTGGGTACTCCTAATGAAGAGGTGTGGCCAGGCGTGAGTAAACTAATGAACTGGCACGAATACCCCCAATGGAATCCTCAAAGTCTGTCAACGGCTGTTCCGAGTTTGGATGAGCTTGGAATCGATCTACTATCTCAAATGTTGAAATATGAACCTTCCAAGAGGATTTCTGCGAAAAAAGCAATGGAACACCCCTACTTTGATGACCTGGACAAGAGGCATCTTTAA 936 0.4712 MEKAGVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGDSIPPQTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATYYSMAVDIWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWNPQSLSTAVPSLDELGIDLLSQMLKYEPSKRISAKKAMEHPYFDDLDKRHL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1983 311 PANTHER CELL DIVISION PROTEIN KINASE 7 309 - -
Vra6g1983 311 Pfam Protein kinase domain 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1983 311 SMART serkin_6 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1983 311 Gene3D Phosphorylase Kinase; domain 1 8 99 - -
Vra6g1983 311 Gene3D Transferase(Phosphotransferase) domain 1 101 310 - -
Vra6g1983 311 ProSiteProfiles Protein kinase domain profile. 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g1983 311 PANTHER - 7 309 - -
Vra6g1983 311 SUPERFAMILY Protein kinase-like (PK-like) 11 306 IPR011009 -
Vra6g1983 311 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Vra6g1983 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1983 Vra-Chr6 36544295 36546177 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vra6g1983 Pkinase 4.3e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1983 6 36544295 36546177 Vra6g1983 6 36544295 36546177 ECH