Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1973 ATGTCAGGGCCGCTTGATCGGTTCGCACGTCCCTGCTTTGAGGGGTTTTCTGGTCATGATGAAAGGAGGGAGAGAAGATCGGATTTAGAGAATTCAGAGGATGATCGGCGAACGAGGATTGGCAGTTTGAAAAAGAAAGCAATCAATGCTTCAAGCAAGTTCAGGCATTCTCTTAGGAAGAAGAGCAGCAGAAGGAAGAGCGCGAGCCGAAGCAATTCGGTCTCCATCGAGGATGTTCGAGATGTTAAGGAACTTCAGGCAGTGGATGCTTTTCGACAGGCACTTATGTCGGAAAGCTTGTTACCGTCAAGACATGATGACTATCATATGTTACTAAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAAGCAAAGCACATGTGGGCCAACATGATCCAATGGAGGAAAGAGTATGGTACTGATACGATTATGGAGGATTTTGAATTCAGTGAGTTGAATGAAGTCCTGCAGTACTATCCACATGGTTATCATGGGGTGGATAAGGATGGAAGACCTGTTTATATTGAAAGGTTAGGCAAAGTTGATCCCTGTAAGCTTATGCAAGTGACTACCATAGAAAGGTATTTGAGATACCATGTGCAGGGTTTTGAGCAAACGTTTGCTGTTAAGTTTCCTGCATGCTCTATTGCTGCAAAGAGACATATAGATTCAAGTACAACCATTTTGGACGTTCATGGTGTGGGTTTTAAAAACCTAACCAAATCTGCTCGGGAACTCATCATGCGGCTGCAGAAAATTGATGTTTCTGTGCAGACATTATGTCAAATGTATATAATCAATGCTGGTCCTGGTTTTAAGCTGCTTTGGAACACAGTGAAATCATTTCTTGATCCCAAAACTACTTCAAAGATAAATGTTCTTGGAAACAAGTTCCAGAACAAATTACTTGAAATTATTGACGCGAGTGAGCTGCCAGAATTTCTAGGTGGTAGTTGCACTTGTATAGAGCAAGGTGGTTGTATGAGGTCTGATAAGGGTCCATGGCAGGATCCAAATATTTTAAAGATGGTTCTCAGTGGCGAAGTGCAATGTTCAAGGCAAATAGTAACGGTTTCTAACGATGAGGGCACCGTTATCGAATGTGACAAGGCATGCTTTCCAATGCCAATTAGAAGCAGTGATACATCAACAGCAGAATCAGGATCTGAAGTTGAAGATATCACTTCTCCCAAAGCCAGTGGAAATTATACAAACCCTAGATTAACTCCTGTTCATGAAGAAGCAAGACTGATTGGTAAGGCTAATCTCTCTGGCGGTTTCTCTGAGTATGATGAGTTTATTCCCATGGTTGACAAGGCCGTTGACCTCGGATGGAAGGAGAAACAAGTAACAACTCAAAACTCGAAAAGTTCAACAGAAAATTTCCTGCTGAGGACTGGAAAATCTGGTGGAAAGTGTGCACATATCTGGATTGTTATTGTGGGCTTCTTTGTTGGCATCTTTGCTCTTGCTCGTTCACTAGCATTTCATGTGACTAAGAGAATAAAGGACACTAAATTTGATTCTACCAAAAGTACACCTAACATGAGCATTGACTCAATAGCCAAGGAAGAATCTCGCCCCCCATCACCTGTTCCTAGATTAACAAAGACAGAACTTGTCTCATCTGCTTTGAAACGCCTTGGTGAGCTCGAGGAGAAGGTTGACATGCTACAGTCAAAACCAAATGTGATGCCATATGAGAAAGAGGAGCTGCTGAATGCTGCTGTTTATCGTGTGGATGCATTGGAAGCAGAACTGATTGCTACAAAGAAGGCTTTATACGAAGCTTTGATCAGACAAGAAGAACTTCTGGCATATATAGATCGTCAGGAAAGAAGTAAATTCGCGAAAAAGAAGTTTTGCTGGTGA 1875 0.4192 MSGPLDRFARPCFEGFSGHDERRERRSDLENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSSRRKSASRSNSVSIEDVRDVKELQAVDAFRQALMSESLLPSRHDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKEYGTDTIMEDFEFSELNEVLQYYPHGYHGVDKDGRPVYIERLGKVDPCKLMQVTTIERYLRYHVQGFEQTFAVKFPACSIAAKRHIDSSTTILDVHGVGFKNLTKSARELIMRLQKIDVSVQTLCQMYIINAGPGFKLLWNTVKSFLDPKTTSKINVLGNKFQNKLLEIIDASELPEFLGGSCTCIEQGGCMRSDKGPWQDPNILKMVLSGEVQCSRQIVTVSNDEGTVIECDKACFPMPIRSSDTSTAESGSEVEDITSPKASGNYTNPRLTPVHEEARLIGKANLSGGFSEYDEFIPMVDKAVDLGWKEKQVTTQNSKSSTENFLLRTGKSGGKCAHIWIVIVGFFVGIFALARSLAFHVTKRIKDTKFDSTKSTPNMSIDSIAKEESRPPSPVPRLTKTELVSSALKRLGELEEKVDMLQSKPNVMPYEKEELLNAAVYRVDALEAELIATKKALYEALIRQEELLAYIDRQERSKFAKKKFCW* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1973 624 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 621 - -
Vra6g1973 624 MobiDBLite consensus disorder prediction 508 535 - -
Vra6g1973 624 MobiDBLite consensus disorder prediction 13 42 - -
Vra6g1973 624 Pfam CRAL/TRIO domain 158 318 IPR001251 -
Vra6g1973 624 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 3 621 - -
Vra6g1973 624 MobiDBLite consensus disorder prediction 380 407 - -
Vra6g1973 624 SMART sec14_4 152 321 IPR001251 -
Vra6g1973 624 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Vra6g1973 624 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 324 IPR001251 -
Vra6g1973 624 Gene3D - 60 139 - -
Vra6g1973 624 MobiDBLite consensus disorder prediction 1 75 - -
Vra6g1973 624 SUPERFAMILY CRAL/TRIO N-terminal domain 83 148 IPR036273 -
Vra6g1973 624 CDD SEC14 153 318 IPR001251 -
Vra6g1973 624 MobiDBLite consensus disorder prediction 49 67 - -
Vra6g1973 624 Coils Coil 542 562 - -
Vra6g1973 624 SUPERFAMILY CRAL/TRIO domain 152 344 IPR036865 -
Vra6g1973 624 Pfam CRAL/TRIO, N-terminal domain 104 131 IPR011074 -
Vra6g1973 624 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Vra6g1973 624 PRINTS Cellular retinaldehyde-binding protein signature 277 296 - -
Vra6g1973 624 Gene3D - 140 348 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1973 Vra-Chr6 36316366 36321157 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1973 6 36316366 36321157 Vra6g1973 6 36316366 36321157 ECH