Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1959 ATGGAGTTCGGAACTGCCGCCGCGACTCTCACGAAGAAGCTCTCTAACGGCTACGGCATCTCCGGAAGATCGGCGTACGACGGCGTTTTCGCCGCTCCAATCAAGCTCCGAGCTCCGACTTTCTCCTCTCAATTCGAGGATTACCGCGAGATTTTCGGCGCCGCCGGAGCTTCGCTCGGTTCCTCTATTCCGATTCTGGAACTTCCGGAACTCAACGACAGCAAGAAAAAGATCGACGACGTTGGGCGCTCGAGGGTCGATTACTCGATGGTCTTCAGTGGGTTTGGGAGTCTAGACACTGCCGTTCCTTTCGAGGAGTTAGTGGCTGAGCCTGTGGAGAAAGATAGCTTCGCTATACGGAGTAAGATCAAAGGAGAAAACCAATATTTCCAGCAAGAGCTTAATACTTGTTCGAAGGAAATTCCAGTGAAATCATGGTCATCCAATGATGCCAAAAGGGTCAATATGTCTTATCATAAAGTTAACCAAGGAAGTGAAAATGGAACAGGTGGGACAACACATATAGCTCAACTCCAGGCTGTCCCTGCTTACACTCGATTAATCGAAGAAGTCAAGCCAATGAAGATAAACAGAGCTAATAAGTCTATACCAGTAGCACAAGATACTGGTAGCGAGGGAATAAAAGAAGCTGCACATTCTACCAATTCGTATACTAGTGCTTCACCTGATAATTCTAAGCAACAGTCTTCCACCAACAATGGCGTAAAAGTTAAAAATAGATCTGGTTCCATTGATCTGTTTTTTGATGCATGTGAGATCAGTAATGGAACGAATCATGTCAAAGTTCCTCGATCAGAGACTACAGAATCTAACTTAAATAAACAAAAAGGATATGCTCTGAAATCAACTCCAATCAAATTCGAGGCATCTAAAAGTAGCTTATCCGAAGGTGTTGCTGGTGCTGATTCGCCACCATACTCAGATGATATGTTAGACTCTAATTCAGAGGTAGCTGCTTCTGTAGCTGCTTTAAGAAAGGCAATGGAAGAGGCTCAAGCAAGAATGAAGGTTGCAAAAGAATTGATGAGAAGAAAGAAAGAAGGTTTTCCTGATCGTGTGAAACGTAAGTCTAACATTGAATTGAAAGCTGATGGGAAAAGAGAGGCTAAAGTCACTCATAGAACAACGAAACTTGATGCAAAGCTAACATTAAGAGAAAAGGATACTTCTCTAAATTCTTCTTCTGAGGCAGGGAGGTCAACAATGAGAATAGAGAAAGCGAGGCCAGATCTGGGGACAAAAGAAACCTGTTGTGCTGAAGAAGTTGTACGCGAAACACCGAAGATGAAATCAGATAAAGCAAAACATGAGAAAGAGGTTGAACAAAAAGAATCAAATGATAAGGGAAAAATACTTGAGCAGAAAGAGGCAGAAAATAACAAGAAAGAGCAGTACTTTAATAAAACAGATAGGAATACCCCTGAAAAACCTGAAGAATCTGATGAAAAAATAGAAATGGTTAGGGAATATTGGGGGCTGGAGAATAATGAAGAGAAGGTTCATGCAGACCATGAAGCAAGTGCATATGTAGAACTTGTCCAGGAAACTAAACATAGGAGTCAAAAGGTAGTAGATGAGACAAAACTGATTCAGGACGTATTTGAAAATGGTTTAATGGACAATGGTCCTAAGGTTAATGAAAATGGGAAAGTTGAGAATCGGGTTAAATCTTTTTATAAACCGGAAGACTATGGAAGCAATGTCGGTGGGCAAGGGTTAATAGAAGGTAATGGGAAAAAAGTTGCTGGTGAGCCAGAAGATGGCAACAAATGTGAAGGGTCCTTTGAGCTGGAAGAATGCAAAATAAATTTGAGAGCTGCTCAGGAACTGCGAGAGGCTGAGAAGAATATTACTGAAGAGCTAAAAGTAAGTGAGAATAAAGTTGACGTGTTCATTGAGCTGGAAGAATGTCAACTGGCAGAAATTCTGGAGCCACTTGACAATGAGAGTGTGTGCAGTCAACATGCCGAAAATTTGACAAGTATGGAGGAAGCGACAGAGAACTTTGGGTGTTTAGAGGACAGAAAGAAAATAAATGATTCTGGTTTTCTGGATATCAGTCAAGACAATGAACATTCCTGTCAGAGAGAAGCCAGAGAAGCCACTGGTAATACCTTTGGTAGTATCTATGTGCAGGAGGAAATCGTGGACCATATTCATAGTAAGAAAAGTAAATTGAATGGAGAGGACATGGTTCTAGATGCCCAAGCAAGTGAGAATGGATTTGAAGGAGCCGCTCAACTGATGGATGGAAATACGAGGGAAAGGACAGATAACAAGGAGACAGTTGAAGTTATTAGAGTGACTCTATCTGATCCTTGTTGCGAGGAGGTAAAAGCAGAGAAAGCTGGCAATACCACAGAAACCAGTTCAAGCTACGAGCCAGATGAAACTGAGAAGTTGAACAAAACTCAAGCAGCTGATATAATCACTGAAAATGAGGAAACTTTGGAAGTAAATCTAGCGGTTCATTCATATGATGAGGTAGATGTTGTATCGGAAGCAAGTAGTGCTTCATTTCAACAAGAGAGATATGAAGAAACAGACCCCGTTCAGGAGACAAGTGATTTCCGTGATAAACATACAGATGAGACTTATTCCTTCACTCAAGTTGCCGTTGAACTAAACGAAGCAGACAATCAAATACAAAATATATTTGAAAAAGAGACTTCCGAAGGTGCTGCTAGAAACAGTGGTGACACTGACATAAAGGCTAGGCAAAACATAGATCAATGCTGGGAAAAGTCAGAAAATTACTGCAATCTGGAAATGCCTGTTGAAGACACAACTCCTGAGTCTGTTGAAATCTGCAAGGATGCAAAGGAGACTAGAGATGCATTAAAGGAAGATTTGGATGAGAATAGGTCTAATTCCTCTAATGGGGAAAATTTGTATGACAATGAAGACATTATAGATGAATCCCAGATACCTAGTACATCTGATTGGAAATCAAGTCCCTTCAAAGAAGTAGAGAAGGTTGAATCAAGTCACATCAATATAAGGGAGAGTAATCAAGTATCCGCAATGGAAGAGAAGGGAGCAAATGACAACTTGCATAAGGAAGAGCAGGAAAAGGAGCACCTCAAAAAACTCGATGCAGCAAAAGAGAGGGAAAGAGAAAGAGAAAAGGAGAAATTAGCTGTAGAAAGAGCAATTCGTGAAGCACGTGAAAGGGCTTTTGCTGATGCCAGAGAAAGGGCGGCAGTAGAGAGAGCTGCTGCAGAAGCACGTCAGAAAAACATTTCTGATGGACGAGAAAGGCTAGGAAAAACCAATAGTCAGGTAAATGAGAAGACCCCAGCTGAGAAGGCTGCTATGGAGGCAAAACTTAAAGCTGAGCGTGCTGCTGTGGAGAGAGCAACTGCAGAGGCACGGGCACGGGCCCTAGAAAGGGCACTTTCTGAGAGAGCTGCCTCTGATGCAAGAAATAAGTCTGATAAACCTGCTGCAGGCTTTGTGGCTTCCCGTGATAATGCAATGAAGCAAAACTTCCATTCAAGATCTTTCAGCCATGTTGTTCGTGATTCTACTGATGTACTTGATGGAGCTAATGGCGATTCTGCTCAGAGATGTAAGGCTAGGTTTGAGAGGCATCAGAGAATAGGGGAACGCGTGGCACATGCTCTTGCAGAAAAGAATATGCGTGACCGGCTTGTGCAGAAGGAGCAAGAGGAGAGAAATAGGGTAGCAGAAGTTCTTGATGCTGATGTTAAAAGATGGTCAAGTGGAAAAACAGGAAACTTGAGGGCATTGCTTTCTACATTACAATATATTCTTGGCCCCGACAGTGGTTGGCAACCGATTCCTTTGACAGATGTAGTAACCACCCCTGCAGTAAAGAAAGCTTATCGTAAAGCTACTCTTTTTGTGCATCCCGACAAGCTGCAGCAGCGGGGAGCAAGCATTCAACAAAAGTACATCTGCGAGAAGGTTTTTGATCTTCTAAAGGAAGCTTGGAACAGATTTAACATGGAAGAACGATAA 4005 0.4227 MEFGTAAATLTKKLSNGYGISGRSAYDGVFAAPIKLRAPTFSSQFEDYREIFGAAGASLGSSIPILELPELNDSKKKIDDVGRSRVDYSMVFSGFGSLDTAVPFEELVAEPVEKDSFAIRSKIKGENQYFQQELNTCSKEIPVKSWSSNDAKRVNMSYHKVNQGSENGTGGTTHIAQLQAVPAYTRLIEEVKPMKINRANKSIPVAQDTGSEGIKEAAHSTNSYTSASPDNSKQQSSTNNGVKVKNRSGSIDLFFDACEISNGTNHVKVPRSETTESNLNKQKGYALKSTPIKFEASKSSLSEGVAGADSPPYSDDMLDSNSEVAASVAALRKAMEEAQARMKVAKELMRRKKEGFPDRVKRKSNIELKADGKREAKVTHRTTKLDAKLTLREKDTSLNSSSEAGRSTMRIEKARPDLGTKETCCAEEVVRETPKMKSDKAKHEKEVEQKESNDKGKILEQKEAENNKKEQYFNKTDRNTPEKPEESDEKIEMVREYWGLENNEEKVHADHEASAYVELVQETKHRSQKVVDETKLIQDVFENGLMDNGPKVNENGKVENRVKSFYKPEDYGSNVGGQGLIEGNGKKVAGEPEDGNKCEGSFELEECKINLRAAQELREAEKNITEELKVSENKVDVFIELEECQLAEILEPLDNESVCSQHAENLTSMEEATENFGCLEDRKKINDSGFLDISQDNEHSCQREAREATGNTFGSIYVQEEIVDHIHSKKSKLNGEDMVLDAQASENGFEGAAQLMDGNTRERTDNKETVEVIRVTLSDPCCEEVKAEKAGNTTETSSSYEPDETEKLNKTQAADIITENEETLEVNLAVHSYDEVDVVSEASSASFQQERYEETDPVQETSDFRDKHTDETYSFTQVAVELNEADNQIQNIFEKETSEGAARNSGDTDIKARQNIDQCWEKSENYCNLEMPVEDTTPESVEICKDAKETRDALKEDLDENRSNSSNGENLYDNEDIIDESQIPSTSDWKSSPFKEVEKVESSHINIRESNQVSAMEEKGANDNLHKEEQEKEHLKKLDAAKEREREREKEKLAVERAIREARERAFADARERAAVERAAAEARQKNISDGRERLGKTNSQVNEKTPAEKAAMEAKLKAERAAVERATAEARARALERALSERAASDARNKSDKPAAGFVASRDNAMKQNFHSRSFSHVVRDSTDVLDGANGDSAQRCKARFERHQRIGERVAHALAEKNMRDRLVQKEQEERNRVAEVLDADVKRWSSGKTGNLRALLSTLQYILGPDSGWQPIPLTDVVTTPAVKKAYRKATLFVHPDKLQQRGASIQQKYICEKVFDLLKEAWNRFNMEER* 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1959 1334 ProSiteProfiles dnaJ domain profile. 1270 1334 IPR001623 -
Vra6g1959 1334 SUPERFAMILY Chaperone J-domain 1200 1330 IPR036869 -
Vra6g1959 1334 Coils Coil 321 355 - -
Vra6g1959 1334 Coils Coil 604 634 - -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 844 865 - -
Vra6g1959 1334 Gene3D DnaJ domain 1206 1334 IPR036869 -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 954 1049 - -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 214 245 - -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 202 245 - -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 431 490 - -
Vra6g1959 1334 Coils Coil 944 964 - -
Vra6g1959 1334 PANTHER AUXILIN-LIKE PROTEIN 602 1334 - -
Vra6g1959 1334 PANTHER AUXILIN-LIKE PROTEIN 1 625 - -
Vra6g1959 1334 Coils Coil 1018 1061 - -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 1083 1099 - -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 1020 1049 - -
Vra6g1959 1334 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 625 - -
Vra6g1959 1334 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 602 1334 - -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 1083 1108 - -
Vra6g1959 1334 Coils Coil 1110 1139 - -
Vra6g1959 1334 MobiDBLite consensus disorder prediction 788 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1959 Vra-Chr6 36180693 36187208 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1959 6 36180693 36187208 Vra6g1959 6 36180693 36187208 ECH