Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra6g1944 | ATGGCCTCAAACTCAGTTTGGACAACAAAGCAGAACAAGAAGTTTGAGAATGCTTTGGCCATCTACGACAAGGACACCCCAGATCGGTGGCAGAACTTGGCCAGGGCAGTGGGAGGAAAAACAGTGGAAGAAGTGAAAAGGCACTATGAGATGCTTGTTGATGATTTGAAGCAGATTGAAGAAGGTCGTGTGCCCTTGCCCAATTACAGAAAAGTTGCTGCAACAGAAGCAGGCAGCATCAGAGGTTACAGTTACATGAATGAAGAACAAAGGATGAAAGTCCTAAGCCTCAGGTGA | 297 | 0.4613 | MASNSVWTTKQNKKFENALAIYDKDTPDRWQNLARAVGGKTVEEVKRHYEMLVDDLKQIEEGRVPLPNYRKVAATEAGSIRGYSYMNEEQRMKVLSLR* | 99 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra6g1944 | 98 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 97 | IPR044636 | GO:0003700 | |
| Vra6g1944 | 98 | CDD | SANT | 7 | 53 | IPR001005 | - | |
| Vra6g1944 | 98 | SUPERFAMILY | Homeodomain-like | 5 | 60 | IPR009057 | - | |
| Vra6g1944 | 98 | SMART | sant | 3 | 55 | IPR001005 | - | |
| Vra6g1944 | 98 | ProSiteProfiles | SANT domain profile. | 2 | 52 | IPR017884 | - | |
| Vra6g1944 | 98 | Gene3D | - | 1 | 66 | - | - | |
| Vra6g1944 | 98 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 97 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra6g1944 | Vra-Chr6 | 36079993 | 36081296 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB-related | Vra6g1944 | None | None | None |
Event-related genes