Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1937 ATGGCAACTTCGCTCGCAATTCTTCTTCCTTTCTTTCTTATATTTAACCTTGCAAGTTCTGAATCGTTTATCGGCGTGAACTATGGGCAAGTCGCCGACAACCTGCCGCCGCCTTCGGCGACGGCGAAGCTCCTCCAATCGACGGCGATAGGGAAAGTCCGGTTGTACGGAACCGACCCAGCGATAATAAAAGCGCTGGCGAACACGGGAATTGGAATCGTGATCGGCGCGGCAAACGGCGACATTCCGGGCCTGGCGTCGGACCCGAACTTCGCGAAAACGTGGGTGAACACCAACGTCGTGCCGTACTACCCCGCGAGCAACATCATCCTCGTGACCGTTGGCAACGAAGTGATAACCTCCAACGACGCGGGCCTCGTGAACCAGATGCTGCCGGCGATCCAGAACGTGCAGAGCGCGCTGGACGCGGCCTCTCTCGGCGGCAAGATCAAGGTGTCGACGGTGCACTCGATGGCGGTTCTGAGGGACTCGGAGCCTCCCTCCGCCGGAAGGTTCCACCCTGAGTACGACACCGTTTTGCAGGGGCTGTTGTCGTTTAACAATGCCACGGGCTCTCCCTTCGCCATCAACCCTTATCCCTACTTCGCCTACAGAAGCGACCCTGGCAGAGCCGACAACCTTGCTTTCTGCCTCTTTCAGCCTAACGCGGGCCGAATTGACTCTAACACCAACATTAAGTACATGAACATGTTCGATGCTCAGGTGGATGCGGTTCGCTCAGCGTTGGATTCTTTGGGGTTTAAGAATGTTGAGATTGTGGTTGCGGAGACAGGATGGCCCTACAAGGGAGACAGCAATGAAGCTGGTCCAAGTCTAGAGAATGCTAAGGCTTATAACGGTAATCTCATTGCACACCTTCGATCAATGGTTGGGACTCCATTGATGCCTGGAAAATCCGTGGACACGTACCTGTTTGCTCTGTATGATGAAGACTTGAAGCCCGGTGCTGCTTCTGAGAGAGCATTTGGACTTTTCAACCCTGATCAAACCATGATCTATGATGCTGGCCTCACCAAACAGCAACAAACCAGTAGCCCCGTGCCAGTAGTTGCTCCGACCACTCCGGATATGTCAAAATCTCCCGTGACTCCAAAGCCAACAACAGTTCCAAGTCCAACCAAAACAAACTGGTGTGTGCCGAAAGCAGGAGTATCAGATCCACAGTTGCAAGCAAATTTGGACTATGCTTGTGGGCAGGGGATTGATTGTACCGCAATTCAACAAGGAGGAGCTTGTTTTGAACCTAACACTTTACTAAACCATGCTGCATATGCCATGAATCTATTGTATCAAACTGCTGGACGGAATCCATTGACTTGTGATTTCTCCCAAACAGCCATGTTATCAACAAATAATCCAAGTTACAAGAGTTGTCTTTATGCTGGTGGAAATGCCTAA 1419 0.5166 MATSLAILLPFFLIFNLASSESFIGVNYGQVADNLPPPSATAKLLQSTAIGKVRLYGTDPAIIKALANTGIGIVIGAANGDIPGLASDPNFAKTWVNTNVVPYYPASNIILVTVGNEVITSNDAGLVNQMLPAIQNVQSALDAASLGGKIKVSTVHSMAVLRDSEPPSAGRFHPEYDTVLQGLLSFNNATGSPFAINPYPYFAYRSDPGRADNLAFCLFQPNAGRIDSNTNIKYMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDSNEAGPSLENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGAASERAFGLFNPDQTMIYDAGLTKQQQTSSPVPVVAPTTPDMSKSPVTPKPTTVPSPTKTNWCVPKAGVSDPQLQANLDYACGQGIDCTAIQQGGACFEPNTLLNHAAYAMNLLYQTAGRNPLTCDFSQTAMLSTNNPSYKSCLYAGGNA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1937 472 Gene3D - 379 468 - -
Vra6g1937 472 Pfam Glycosyl hydrolases family 17 24 341 IPR000490 GO:0004553|GO:0005975
Vra6g1937 472 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 458 IPR044965 GO:0004553|GO:0005975
Vra6g1937 472 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 6 458 - -
Vra6g1937 472 MobiDBLite consensus disorder prediction 350 378 - -
Vra6g1937 472 SMART X8_cls 383 467 IPR012946 -
Vra6g1937 472 Gene3D Glycosidases 23 352 - -
Vra6g1937 472 Pfam X8 domain 384 454 IPR012946 -
Vra6g1937 472 SUPERFAMILY (Trans)glycosidases 24 342 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1937 Vra-Chr6 35998303 36000814 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1937 6 35998303 36000814 Vra6g1937 6 35998303 36000814 ECH