Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1935 ATGGCTGAACAACGCGCCACCTCCGACAATCGCCACCAGCTCTCCGTCGCACCGCCATTGCAGATCTCCAAAGATGCCCCAGGATCTGACAATTCCATTCCACTCTCACCACAGTGGCTTCTGCCAAAGCCGGGGGAGAATAAACTTGGAACAGGATCTGTGGAGAACCACATGGTCTCGAACCCACCTTATGGCCATCGCTCAGAGACTGTCAAGACATCTGGAAACGGAGAGGATGTGCATGATGTCCATAAGAAAAGGGATGTCTTTAGGCCATCCATGTTTGACTCAGAAAGTGGACGTCGTGATCGTTGGCGTGATGAGGAGAGAGACACCAAGTCCTCCATTCGGAAGGATCGTTGGAGAGATGGGGACAAAGACCTAGGTGATTCTCGCAGAGTGGATCGATGGACAGATAATATGTCTGCAAGGAACTTTGCAGAAGCACGGCGTGGTGCATCTGATAATCACAGATGGAATGATTCAGGAAACAGAGAAACTAACTTTGACCAGAGGCGTGAAAGTAAGTGGAACACCCGCTGGGGTCCTGATGACAAGGAGCCAGAAGGCATCCGTGAAAAATGGAGTGACTCTGGAAAGGATGGTGATATACATTTGGAAAAAGGTATGACTAACATTTCCAGTCAGGGAAAGGACGAGAAGGAGGGAGAACACTATCGGCCATGGAGACCTAACTACTCACAGGGCCGTGCAAGGGTAGATCCTTCCCATACAACCCCAAACAAACCAGTCTCTACATTTTCCTATGGGCGTGGTCGTGGGGAGAATACACCCCCAGTTTCTAGTATTGGACATGGACGTACTGGTTCCCTTGCTAGCTCTTTGAGTAGCACATACTCTGGAACTGCATTGGAAAAGGTTCAAAGTGGACTTGAAGAACTGAACCCCTTTAGATATAACAGGACAAAATTGCTTGATGTGTACAGAGTGAATGGTATGGGTACAAATAGAAAACTAGTTGATGATTTTGTGCAGGTACTTAATCTTACTCAGGATGAACCCTTGGAGCCTCTAGCTATTCTGGCACCAAATCCTGAGGAACTGGCTGTCTTGAATGGAATTGACAAAGGGGAGATAATTAGCAGCAGTGCTCCTCAGGTTCCAAAAGATGGAAGGTCAACAGATTTTACTCACACAAGAAGAATGAAGCCTGGAAGTGCACCTTTCCAAGATAGAGGTGAAGATGGAGGTTCTTACAAAGTGCCTGAAGAGGTTTCCAGTAATAAAGATTCATCATTTGAAGGAAATACTTCTGTTCATGCTGGTGCTTCATGGCGAACAATGCCACTTGGTGATCATGCTGCCCAGTTTCACGATGGTAGAGATGTAACTAGTGATGTTAGATTGAGAAAATCGGATCTGAACTCACTCCAGCCAAAAGATCCTCATAATCAGTGGGAAAATAATTTGGGTTATTTATCTGACTCCAAAGAAGTAGGTAAGTGGCAAGCTAGTGAAGATCCTGTTATTAAGAGGCAGTTGTCTGGCATTTTGGATAGTGAACTTGAAATCAGAAGAGTTCAACAGACTGCTCCAGAGGAGTTATCCCTTTTGTATAAAGATCCTAAGGGTCTAATCCAAGGTCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGGTATTTTGGTATCGATTTACCTGTTCGTCTGGAAAATTCAGCAGCTGACTCACCATGGTTGTCTCTTGGTGATGCCATGCCCCATTTACGAGCTAAAGCTCGACCTCCACCTGGGTTTTCTACACCAAAGCCAAATGACTTCACAGATATTCCTGCCCGACAAATTTCCAGTACATTTGGGAATACTCTTACTGGTTTGAATGAGCTTGACATTTTGCGAAGTGATTCTAGGCATCGTCCAAATCCTGATACTGAAGCTGAAAATAGGTTTCTGGAGTCACTCATGTCTGGTAGCAAGAACAGTCCTCCCCTTGATGGCCTGGCATTGTCAGAAGGTTTACAAGGGTTTGTTGGAAATAATCCTGGTAATATGGGTACATCAGCAGTTGATAATGGAAATCTTTACTTGCTTGCTAAGAGGATGGCACTTGAACGACAACGGTCCTTGCCTAGTCCCTACCCTTACTGGCCAGGGCGTGATGCAGCTTCGTTTGCTCCAAAGCCGGAGGTTGTTCCAGATGCCTCCATGCATTCTAAACTATTGTCTTCAGTGAGTGATAACTCTCGGCAACCTCAATCCCAAAATTCCGAGTTAATGTCAATCATCCAAGGTTTATCTGATAGGACATCTGCTGGCCTAAATAATGGTGCTGCTGGCTGGCCTAATTATCCCTTACAAGGTGCATTGGATCCCCTGCAGAATAAAATTGACATGCTTCATGATCCGAATTTTCCTCAAATGCCATTTGGAATTCAGCAGCAAAGGCTGCCAGCACAAAACCACTTGTCTTTAAGCAATTTACTGTCTCAAGCTGCTTCTGATAACCCAAATAACCCTTTGACAGCGGAGAAGCTACTTTCTTCAGGTTTATCACAAGATCCTCAGATATTGAATATGTTGCAACAGCAGTACTTGTTGCAACTGCATTCTCAAGCGGCTGCTCAATCACAGCAGATCCCCTTGATTGATAAACTTCTATTGCTGAAGCAACAACAGAAACAGGAGGAGCAGCAGCAGCTGCTACGGCAACAACAACAACAATTGCTTTCTCAAGTGTTGCAAGACCAACCGTCTGGCCAGCTCTTCAGCAATTTATCTTATGGACAGTTGCAAGGTGTATTACCAATAGGTAATTTGCGTGTGGATCCTTCTCTAGTTCAACCACAACAAGAGGTTTTTCCCATGAGCTCTCAGACACCAATCTCCAATGTGCATAATGAGCATAATTCTAATTCTTTGAATCTACCACCTAAAGTTAGTCAAGATACAAGTTCTAATGTAAGCAGCCAATCTTCTTTACGTCTTCCGCACCAATTATTTGGCGATGCTCATCCAGAAAATTGGGGCCCTAATCTTACTGAACAAATTATCGATCAGCATCAGAAGGAATCATTTCCAGTATCATCAACTCAGGCTGATGGTTCTGCATTGCTTGAACTGAACAGATTCAAAGAGGAACCCCTCATTGCATCTCTTTCTCCTTCTGATTATGCTGCTAAGTCAGTGGAACAGGTGCCACCCAGCAATTTTAGGCCTGATGCTGTGGTTGTGACCTCAACTTCTAAGCCTGGGGAAATTTCTGGAAATGTGGAGTCTTTTGCATCCAGCATTGCCTTATCTACAACTGTATCTAATGTGTCACCACCAGTGAGTGGTCCTGGTACGGAGGTGAAGACCAAATTGGATATTGTGAATCAAGAGCATCATGCTGGGAACGGCGGCATTGTATCTGAGCCATCTCTGGGAGACATAAGAAAGATTGAAGCTCAAGAACCTAAAAAGGCTAGTGAGAAGAAATCTAAGAAGCAAAAATCAACCAAATCTCAGTCTTTTGATCAAACAAAGGGAGCGGTAAAAAATTTGACTTTGCAGCCATCAAAGCAGTCAGAAACTGAAATGGCGAAGTTAAGTGATTTTAGGGAAGCTAAGATTGACGAATCGTTAGATGATACAAATATGCAACAAACAAGAGTTAAGGGAACACGGACTGGAAGTGCTGTCTCAGAGACTGGTGATCACCAACATGCTGGTGGCTGGTCTGGTATTATTACTGGAAAGATAGCTGAAACAGTTGGTGTAGGTGAGGCCATTTCAACTACATTTTTGACACAGAAAACTGAGGTACCTGCCGGACGAGCTTGGAAACCTGCTCCAGGTGTCAAACCGAAATCTTTCTTAGAAATTCAACAGGAAGAAAAAAGGAAGGCAGAGACCGAAACACTAGTATCTGATGTTGCTGTTTCTGTCAATTCAATGAGCCTAGCAACTCCCTGGGCTGGGATTGTAGCCACTCCGGACTCCTTGAAGGTATCTAGTGACAGTGTCAGAGAAGGAGGCAATACTGAGAATCCTGTTAAATCTGAAACTTCTCAAAATGTCAAGAGCAAGAAAAGCCCTCTACATGATCTATTAGCAGAAGAAGTTCTAAAGAAATCTAATGAAATAGATGCTGAGGTTCCAGATAGTATATTGCCCTCACATAATATAGTTGTACAATCAGAGTCATTGGATGACGGCCATTTTATTGAGGCGAAAGATACTAAAAGAAGCCGAAAAAAGTCAACAAAATCGAAGGGTTCAGGAACTAAAGCTTCATTGCCCATTGCATCATCTGATGTACCCATAGCTTCAAGCCCCAATGAAAAGGGAAAAAACTCCCGCTTGGCACAGCAGGAAAAGGAAGAGTTGCCTGTCATCCCTGCAGGACCCTCTTTCAGTGATTTTGTTCTTTGGAAAGGAGAGCGAGAACCACCAAGCTTGTCTCCTTCTCCAGCATGGTCTACTGATTCCGGTAGGGTTCCAAAACCAACTTCATTGAGGGACATTCTAAAGGAACAGGAGAAAAAGTCCTCTTCTGCAATTCCTGTTAGCCCAGTGCCTCCGCCTCCAAAATCTCAGCCTACCCAGTCTACACGGAATAGTGCTTCTTCATGGTCAGTTTCAGCATCCTCTCCATCTAAAACTGCTTCTCCAATTCAGATAAATACCCAAGCTTCTCAATCAAAATACAAAGGAGATGATGATTTGTTCTGGGGTCCAATGGAGCAATCTAAGCAAGATGCTAAGCAGTCTGATTTCCCTCAGCTTGCTAGCCAAGGGAGTTGGGGTTCAAAAAACGTAAGCTCGAAAGGTAATTCCCCCGGACTATTGACAAGACAGAAATCAGTGAGTGGTAAACAAGCTGAACGGTCTCTAGCATCATCACCGGCCTCTTCTCAATCAATGCTGAAATTGAAAAAAGATGCCATGACAAAGCATTCTGAGGCCACGGATTTCAGAGATTGGTGTGAGAATGAGTGTGTTAGGCTTATAGGTTCAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCGGAAGCTGAACTGCTCCTCATAGAAAACCTTGGATCATATGATCCTGACCATGAATTCATTGATAAGTTCCTGAATTACAAGGAGTTGTTACCATCGGATGTTTTGGACATAGCTTTTCAGAGTAGGAGTGAGAAGAAAGTTGGTGGACATGGTGCGGCATGGACAGCTTCAGCTAATGCAGATACGCAGGATGTTGACTTGACTGAAGGATCCTCTAAAGGTGGTGGAAAGAAGAAAGGTAAGAAGGGGAAAAAGGTTAGCCCTTCAGTTTTGGGATTTAACGTTGTGAGTAACCGTATCATGATGGGTGAGATCCAGACTGTAGAAGATTAA 5343 0.44 MAEQRATSDNRHQLSVAPPLQISKDAPGSDNSIPLSPQWLLPKPGENKLGTGSVENHMVSNPPYGHRSETVKTSGNGEDVHDVHKKRDVFRPSMFDSESGRRDRWRDEERDTKSSIRKDRWRDGDKDLGDSRRVDRWTDNMSARNFAEARRGASDNHRWNDSGNRETNFDQRRESKWNTRWGPDDKEPEGIREKWSDSGKDGDIHLEKGMTNISSQGKDEKEGEHYRPWRPNYSQGRARVDPSHTTPNKPVSTFSYGRGRGENTPPVSSIGHGRTGSLASSLSSTYSGTALEKVQSGLEELNPFRYNRTKLLDVYRVNGMGTNRKLVDDFVQVLNLTQDEPLEPLAILAPNPEELAVLNGIDKGEIISSSAPQVPKDGRSTDFTHTRRMKPGSAPFQDRGEDGGSYKVPEEVSSNKDSSFEGNTSVHAGASWRTMPLGDHAAQFHDGRDVTSDVRLRKSDLNSLQPKDPHNQWENNLGYLSDSKEVGKWQASEDPVIKRQLSGILDSELEIRRVQQTAPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSPWLSLGDAMPHLRAKARPPPGFSTPKPNDFTDIPARQISSTFGNTLTGLNELDILRSDSRHRPNPDTEAENRFLESLMSGSKNSPPLDGLALSEGLQGFVGNNPGNMGTSAVDNGNLYLLAKRMALERQRSLPSPYPYWPGRDAASFAPKPEVVPDASMHSKLLSSVSDNSRQPQSQNSELMSIIQGLSDRTSAGLNNGAAGWPNYPLQGALDPLQNKIDMLHDPNFPQMPFGIQQQRLPAQNHLSLSNLLSQAASDNPNNPLTAEKLLSSGLSQDPQILNMLQQQYLLQLHSQAAAQSQQIPLIDKLLLLKQQQKQEEQQQLLRQQQQQLLSQVLQDQPSGQLFSNLSYGQLQGVLPIGNLRVDPSLVQPQQEVFPMSSQTPISNVHNEHNSNSLNLPPKVSQDTSSNVSSQSSLRLPHQLFGDAHPENWGPNLTEQIIDQHQKESFPVSSTQADGSALLELNRFKEEPLIASLSPSDYAAKSVEQVPPSNFRPDAVVVTSTSKPGEISGNVESFASSIALSTTVSNVSPPVSGPGTEVKTKLDIVNQEHHAGNGGIVSEPSLGDIRKIEAQEPKKASEKKSKKQKSTKSQSFDQTKGAVKNLTLQPSKQSETEMAKLSDFREAKIDESLDDTNMQQTRVKGTRTGSAVSETGDHQHAGGWSGIITGKIAETVGVGEAISTTFLTQKTEVPAGRAWKPAPGVKPKSFLEIQQEEKRKAETETLVSDVAVSVNSMSLATPWAGIVATPDSLKVSSDSVREGGNTENPVKSETSQNVKSKKSPLHDLLAEEVLKKSNEIDAEVPDSILPSHNIVVQSESLDDGHFIEAKDTKRSRKKSTKSKGSGTKASLPIASSDVPIASSPNEKGKNSRLAQQEKEELPVIPAGPSFSDFVLWKGEREPPSLSPSPAWSTDSGRVPKPTSLRDILKEQEKKSSSAIPVSPVPPPPKSQPTQSTRNSASSWSVSASSPSKTASPIQINTQASQSKYKGDDDLFWGPMEQSKQDAKQSDFPQLASQGSWGSKNVSSKGNSPGLLTRQKSVSGKQAERSLASSPASSQSMLKLKKDAMTKHSEATDFRDWCENECVRLIGSKDTSFLEFCLKQSRSEAELLLIENLGSYDPDHEFIDKFLNYKELLPSDVLDIAFQSRSEKKVGGHGAAWTASANADTQDVDLTEGSSKGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQTVED* 1781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1935 1780 Coils Coil 875 896 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 238 259 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 150 207 - -
Vra6g1935 1780 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1780 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1390 1629 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 368 425 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1139 1183 - -
Vra6g1935 1780 Pfam GYF domain 526 570 IPR003169 GO:0005515
Vra6g1935 1780 Gene3D - 506 588 IPR035445 -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1733 1757 - -
Vra6g1935 1780 ProSiteProfiles GYF domain profile. 521 572 IPR003169 GO:0005515
Vra6g1935 1780 CDD GYF 521 578 IPR003169 GO:0005515
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1319 1348 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1566 1627 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 214 228 - -
Vra6g1935 1780 SMART gyf_5 522 577 IPR003169 GO:0005515
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1 133 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 411 425 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 72 133 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1408 1434 - -
Vra6g1935 1780 SUPERFAMILY GYF domain 515 578 IPR035445 -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1139 1157 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 145 276 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1319 1346 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1517 1552 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 948 979 - -
Vra6g1935 1780 MobiDBLite consensus disorder prediction 1158 1181 - -
Vra6g1935 1780 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1935 Vra-Chr6 35950513 35958929 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1935 6 35950513 35958929 Vra6g1935 6 35950513 35958929 ECH