Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1928 ATGCCATCTAATTACTTATCGAGGCTTGGAGCTTCAATTCAGAGATCGGTTGTGGGGAAAGAAAGGGGAATACTGGACTCCGCTGAAATTCTGATTGGGCAAGGAAAGCTGTGGTTTGGTAGTTCTAAGTTTTTTCATTCTGTGCATAGTTCATATTGTGTGGAACTTAGCCTGCTCGTGCGCCCTGGCGTTGCCTTAGCTTCCAGCTCTGAATTGGTTGGAAAAAAAAGAACTTTGTCTGTGGTTGACACTCTGTCTCGGACATTTTCGGTTCCGTCTGTGTCGGGGCCGTCGTTTCAGGTCTGTGGATACCACATTGGTTCTGCCCTTGCCGGCCCTGATCAGTTTTCTAGTGGTGGAACTGGATTTCGTATTAAGGCAATGGCTGCTCACTTGCCCGGGGTAGTGGTTGGTGAATCTTATGTAGACAACCCGAGTTTGAAGGGTGTTCGCCGATCAGTGTCAACCAAGAGGATTGGTAGTATATGTTTAAACACGAGTTTGAGGAATGGTGGAAAAGTGAGCATGAGTTTGAAAAAGCATCAGCAGCCAGATAACAGTGCGATTTATGGATATTTTATTTATAATGCCGCCAAGACCTTGTATAATTCTCACCCTTACATGCAGTCAGGATCTGGAGCTTTCCATAGCCTGTCAAACTCGTGTTACTCAGTTGGGCCTGCTCATGACGTACCTTTTGACACTTCTGTCCGTGAGGAACAGTCAAGCAGTTCTGCAGATTCATCTGAACAGAAAACTCCTTCAGGGAAGACCCTTAAGTTAGTATCAGGATCATGCTACTTGCCTCATCCTGATAAAGAAGAAACCGGTGGAGAAGATGCTCATTTTATATGTTCTGAGGAGCAAGCAATAGGGGTGGCAGATGGTGTTGGTGGATGGGCAGATCTTGGTGTTAATGCTGGATATTACTCTCGTGAGCTCATGTCCAAATCAGTGGAAGCTATTCAGGAGGAGCCCAAAGGTTCAATTGATCCAGCTAGGGTGCTGGAAAAAGCACACTCAAGTACAAAAGCTAAGGGTTCCTCTACCGCATGCATCATTGCACTTACTGATCAGGGCCTTAATGCTATCAATTTAGGAGACAGTGGGTTTATGGTAGTCCGAGATGGGTGCACCGTATTCCGATCCCCAGTGCAGCAACATGATTTCAATTTCACCTATCAGCTGGAATGTGGTAGGAATGGTGATTTACCTAGTTCTGGTCAGGTTTTTACCATTCCTGTTGCACCTGGCGATGTCATAGTTGCTGGTACAGATGGGCTGTTTGATAACTTGTACAATAATGAGATTACGGCAGTGGTGGTTCACGCCATGAGAGCGGGATTAAGTCCTCAAGTTACAGCCCAGAAGATAGCTGCATTGGCTCGTCAACGGGCACTTGATAAAGACAGACAGACTCCTTTCTCAACCGCTGCTCAAGATGCTGGTTTCCGTTACTACGGTGGCAAGCTTGATGATACCACAGTTGTAGTTTCATACGTTACTGGCTCAGCAGACGCATAA 1524 0.4613 MPSNYLSRLGASIQRSVVGKERGILDSAEILIGQGKLWFGSSKFFHSVHSSYCVELSLLVRPGVALASSSELVGKKRTLSVVDTLSRTFSVPSVSGPSFQVCGYHIGSALAGPDQFSSGGTGFRIKAMAAHLPGVVVGESYVDNPSLKGVRRSVSTKRIGSICLNTSLRNGGKVSMSLKKHQQPDNSAIYGYFIYNAAKTLYNSHPYMQSGSGAFHSLSNSCYSVGPAHDVPFDTSVREEQSSSSADSSEQKTPSGKTLKLVSGSCYLPHPDKEETGGEDAHFICSEEQAIGVADGVGGWADLGVNAGYYSRELMSKSVEAIQEEPKGSIDPARVLEKAHSSTKAKGSSTACIIALTDQGLNAINLGDSGFMVVRDGCTVFRSPVQQHDFNFTYQLECGRNGDLPSSGQVFTIPVAPGDVIVAGTDGLFDNLYNNEITAVVVHAMRAGLSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYVTGSADA* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1928 507 SMART PP2C_4 252 499 IPR001932 -
Vra6g1928 507 ProSiteProfiles PPM-type phosphatase domain profile. 265 501 IPR001932 -
Vra6g1928 507 SUPERFAMILY PP2C-like 266 499 IPR036457 -
Vra6g1928 507 SMART PP2C_SIG_2 274 501 IPR001932 -
Vra6g1928 507 PANTHER PROTEIN PHOSPHATASE 2C 90 506 IPR039123 -
Vra6g1928 507 MobiDBLite consensus disorder prediction 236 257 - -
Vra6g1928 507 Pfam Stage II sporulation protein E (SpoIIE) 290 500 IPR001932 -
Vra6g1928 507 Gene3D - 271 400 IPR036457 -
Vra6g1928 507 MobiDBLite consensus disorder prediction 237 257 - -
Vra6g1928 507 Gene3D - 404 505 IPR036457 -
Vra6g1928 507 PANTHER PROTEIN PHOSPHATASE 90 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1928 Vra-Chr6 35904039 35908442 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1928 6 35904039 35908442 Vra6g1928 6 35904039 35908442 ECH