Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1909 ATGTTCCAGAACAAGAGTGTCTCGATCTCCTTGTCGGACGAGGAATCCGACGAGCTGGGTCGGATGCGGGTCCGCGCGCGACGGAAGCGCAAGAAACTCGGCAACAGAAGATTGCTCCGGAAGCTGTTCGTCAGATATTGGATGCTGCTCGTCATTGTTCCAGCTGCGGGATTGTTCATATTCGAGGCCACCAGAATTGGGCGAAGCTTGAATGGTTTAAACACGAACAGCCGCATAGAAACACGCACTCACAGAATAGATGGATCTAGTTCCACATTGCGGAAGGCCCCCACCAACTTGAATCGCCTCGATCCTACCACACATGTTGTGGCTGGCATCAGAGAGCGTTGTTTGAAGCTCCTACCACCTGAAAATCTTGAGCAGCTGGATATACCTGTGGAACAAGAATCTTCTAGAATTCCTGTTGCTGAAGTTTTATACATGTCAGAGAGTGATAGGTCTTTTGTAGGTGCGAATGTTACGTTGTCTCAATTACGTACTGAGGACACACGGTTTAATTTATTTACTGGAAATCAAACATTTGAGGAGAGAGATAGAAGTTTTGAGGTGAAAGAAACTATGACGGTACATTGTGGGTTTTTCAGTGTGAATGGTGGGTTTAAGATATCTGATCAAGATAAAAGTTACATGCAAGGTTGCAAAGTCGTGGTATCTACTTGTGCATTTGGTGGTGGAGATGATCTCTATCAGCCAATTGGAATGTCTCAGGCTTCGCTTAAGAAGGTTTGCTATGTTGCATTCTGGGATGAAATTACCGTCAAAGCGCAGGAGTTGGTGGAGCGTAGAATCGGGGAAAATGGCTTTATTGGAAATTGGCGTGTTGTTGTTGTTCGAGATCTTCCTTTTGCCGATCAAAGGTTGAATGGTAAAATTCCCAAGATGTTAAGCCATCGGCTTTTTCCTCAAGCTAAATACTCAATTTGGGTAGACTCTAAGTCCCAATTCCGGAGAGACCCACTAGGTGTGTTGGAAACACTTCTTTGGCGCCCAAAATCTTTGCTTGCCATATCAGAACATGGAGCTCGCAGTAGTGTCTACGATGAGGCTAAGGCTGTTGTCAAGAAGAACAAAGCCAAGCCAGAGGAAGTTGAAGTGCAACTGAATCAATACAGAAAAGATGGCTTGCCGGAAGACAAGAGATTTAATGGGAAAAAAGCTCTATGTGAAGCCTCTGTTATCATCAGGAAGCATACACCCCTAACTAATCTATTGATGTGCGTCTGGTTTAATGAGGTGGTTCGTTTCACTTCTAGGGATCAGCTCAGCTTCCCTTATGTCCTGTGGAGGCTGAAAGCTTTCCAAAACATCAATACTTTTCCTGTTTGTACTCGCAAAGATCTTGTCAATAGTATGGGCCATGTCCGCAAGGCCAAACCCTTGCAAAGCTGA 1410 0.4504 MFQNKSVSISLSDEESDELGRMRVRARRKRKKLGNRRLLRKLFVRYWMLLVIVPAAGLFIFEATRIGRSLNGLNTNSRIETRTHRIDGSSSTLRKAPTNLNRLDPTTHVVAGIRERCLKLLPPENLEQLDIPVEQESSRIPVAEVLYMSESDRSFVGANVTLSQLRTEDTRFNLFTGNQTFEERDRSFEVKETMTVHCGFFSVNGGFKISDQDKSYMQGCKVVVSTCAFGGGDDLYQPIGMSQASLKKVCYVAFWDEITVKAQELVERRIGENGFIGNWRVVVVRDLPFADQRLNGKIPKMLSHRLFPQAKYSIWVDSKSQFRRDPLGVLETLLWRPKSLLAISEHGARSSVYDEAKAVVKKNKAKPEEVEVQLNQYRKDGLPEDKRFNGKKALCEASVIIRKHTPLTNLLMCVWFNEVVRFTSRDQLSFPYVLWRLKAFQNINTFPVCTRKDLVNSMGHVRKAKPLQS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1909 469 PANTHER ALKALINE CERAMIDASE-RELATED 4 467 IPR006852 -
Vra6g1909 469 PANTHER OS01G0749100 PROTEIN 4 467 - -
Vra6g1909 469 Pfam Protein of unknown function (DUF616) 166 460 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1909 Vra-Chr6 35715317 35718420 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1909 6 35715317 35718420 Vra6g1909 6 35715317 35718420 ECH