Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1907 ATGGCATCATCGTCTTCCTCGACACTCTCCTCCCCATTCCTGGGACTGGAGTTCCCCTCTGCAAGAAAACAACGCTCTTCCAATTACATCCCCTTCATCAGAGCCTCCGTTTCTGAGAAACCACCACCGGCAGTGTCGGTCACCTCCCCCGAGCCCACCAAGCTCCCCATCCGCAAAATCCCCGGTGACTGGGGTTTGCCGGTCATCGGTCCCTTAAAGGACCGTCAAGACTATTTCTACAATCAAGGCCGCGACGAGTTCTTCAAATCCCGCATCCAAAAGTACCAGTCAACGGTCTTCCGTACCAACATGCCTCCCGGTCCCTTCATCACCTTCAAACCAAACGTCGTCGTTCTACTCGACGGCAAGAGCTTCCCCGTCCTCTTCGACACCTCCAAGGTCGAGAAAAAAGATGTTTTCACGGGAACATACATGCCCTCCACCGACCTCACCGGCGGCTACAGAGTCCTCTCCTACCTCGACCCCTCCGAACCCAAACACGCCCTCCTCAAGCAGCTCATCTTTTTCCTCCTCAAGTCCCGACGCTCCCACGTCATCCCGGAGTTCCACGCCTCCTACGAAGACCTCTTCAACCAGCTGGAGTCCGACCTCGCCGAAACCGGCAAAGCCAGCTTCGGCGACGCCAACGACCAAGCCGCGTTCAACTTCCTCGCCCGGTCTCTCTTCGCCGCCAACCCCGCCGACACCAAACTGGGCCAAGACGGCCCAAAGATAGTGCAGAAATGGGTTCTCTTCCAGCTGGGCCCACTCCTCCGCCTGGGTCTCCCTCAGTTTCTGGAAGAATCCACCATTCGCACCTTCCGCCTCCCTGCCTCCCTCATCAAGAAAGACTACCAGAGACTCTACGACTTCTTCTACTCCTCTTCTTCCACCGTCCTCGACGAAGCAGAGCGATTGGGAATCACGCGCGACGAGGCTTGCCACAATCTTTTGTTCGCCACCTGCTTCAACTCCTTCGGCGGGATGAAGCTGTTCTTCCCCAACATCATCAAGTGGATCGGGCGGGCGGGGGTGAAGCTCCATGCGCGCCTGGCGCAGGAGATTCGGTCCGCCGTGAGAGACGCGGGCGGGGAGATCACGATGGCAGCGATGGAGAAGATGCCTCTGATGAAGTCGGTGGTTTACGAAGCCTTCCGCATCGACCCTCCAGTGCCGTTGCAGTTCGGGAGGGCGAAGAGGGACCTTCTGATCGAGAGCCACGATCACGCGTTCCAGGTGAAGGAGGGGGACCTGCTTTTCGGGTACCAACCGTTTGCCACGAAGGATCCTAGGATCTTCGAGAGGGCCGAGGAATTTGTGGGAGACCGGTTCGTTGGGGAAGAAGGGGAGAAGCTCCTGAAACACGTGCTGTGGTCGAATGGACCCGAAACTGAATCTCCCACACTCGGAAACAAGCAATGTGCTGGGAAGGATTTCGTTACCTTAGTCTCAAGGCTTCTTCTTGTCGAGTTTTTTCTCCGCTATGACTCCTTCGATATTCAGGTTGGAACTTCTCCTTTAGGTTCTAAAGTCACCATTACCTCCCTCAAGAGATCAAGCTTTTAG 1566 0.5632 MASSSSSTLSSPFLGLEFPSARKQRSSNYIPFIRASVSEKPPPAVSVTSPEPTKLPIRKIPGDWGLPVIGPLKDRQDYFYNQGRDEFFKSRIQKYQSTVFRTNMPPGPFITFKPNVVVLLDGKSFPVLFDTSKVEKKDVFTGTYMPSTDLTGGYRVLSYLDPSEPKHALLKQLIFFLLKSRRSHVIPEFHASYEDLFNQLESDLAETGKASFGDANDQAAFNFLARSLFAANPADTKLGQDGPKIVQKWVLFQLGPLLRLGLPQFLEESTIRTFRLPASLIKKDYQRLYDFFYSSSSTVLDEAERLGITRDEACHNLLFATCFNSFGGMKLFFPNIIKWIGRAGVKLHARLAQEIRSAVRDAGGEITMAAMEKMPLMKSVVYEAFRIDPPVPLQFGRAKRDLLIESHDHAFQVKEGDLLFGYQPFATKDPRIFERAEEFVGDRFVGEEGEKLLKHVLWSNGPETESPTLGNKQCAGKDFVTLVSRLLLVEFFLRYDSFDIQVGTSPLGSKVTITSLKRSSF* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1907 521 Pfam Cytochrome P450 348 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1907 521 Gene3D Cytochrome P450 55 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1907 521 PRINTS E-class P450 group IV signature 374 390 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1907 521 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1907 521 PRINTS E-class P450 group IV signature 474 492 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1907 521 SUPERFAMILY Cytochrome P450 55 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1907 521 PANTHER CYTOCHROME P450 26 39 507 - -
Vra6g1907 521 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 39 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1907 Vra-Chr6 35679827 35681614 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1907 6 35679827 35681614 Vra6g1907 6 35679827 35681614 ECH