Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1898 ATGGCCCTTACGGACCTATTCACCGGAGAGATAGCCTCCGATCTCTGGAAAATGCTCATCACAATTTCCCGAAAGGCCCTGCGCTGCAAGTCCAGCGCGGAGCAACTCATCACCTACGTGCGCGAGATTCTTCCCACCATCGAGGAAATCAAGTACTCCGGGGTGGAGCTTCCGGCGCCGAGGCAGTCTCAGCTAGACCGCCTGTCGGAGATTCTGCGCTCCGGCGTGGAGCTTTCGCACCAGGCGCTGTCCTCCAGCCGCTGGAACGTGTACCGGAACTTCCAGCTGGCGAAGAAGATGGAGAAGCTGGAGAAGCACGTGACGAGGTTCCTGCAGGTGCCCATGCAGGCGCACATACTGGCCGACGTGCATCACGCGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGTCGAACCGGCGGATGGAGCGGTTTTTGGAGGAGATGAAGATCGGAGTGAACGGCGGTGGGTGGGTGGAGGAGGCTGTGAAGAGCATGCAGGAAGATGAGACGTGGGTGGAAGGTTGCAACGGGAATAACGGTTTCGGTGTTGGGTTGGATTTCGGGAAGAAGAAGGTTATGGAGATGGTTTTCTCTAATAATGATGCTGATTGGATTGTCGGGATTTGTGGGATTGGTGGCTCCGGGAAAACCACCCTTGCCAGAGAGCTCTGCAGAGACGACCAAGTCCGATGTTATTTCAAGGACAGAATTTTGTTTTTGACCGTGTCACAGTCTCCGAATGTGGAGCAGCTGAGAGCGAGGATCTGGGGACACATCATGGGCAACCAAGGCTTGAATGGAAATTACGTGGTTCCGCAATGGATGCCACAGTTTGAGTGCAAAGGGGAAGCTCAAGTTCTTGTTGTTCTTGATGATGTGTGGTCGCTCTCCGTGCTGGAGCAGCTTGTGTGGAAAATCCCTGGCTGCAAATTCCTTGTGGTGTCTCGATTCAGATTCCCGACATTCTTCAGTGCAACTTATCACGTGGAATTGCTGGGTGAAGAGGATGCCCTCTCTTTGTTTTGCCACCATGCTTTTGGACAGAAGTCAATTCCTTTGGGTGCTAATGTGAGTTTGGTGAAGCAGGTTGTGGCTGAGTGTGGAAAACTTCCACTGGCTCTAAAGGTGATTGGAGCTTCCTTGCGAGACCAGAATGAAATGTTTTGGCTCAGTGTTAAGAGTAATCTTTCTCAAGGTCACAGCATTGGTGAGTCCTATGAAATCAATCTGATTGATAGAATGGCAATTAGTACAAACTACTTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGCTCTTTCCCTGAGGATAGAAAGATCCCTCTCGAAATTCTAATCAATATGTGGGTTGAAATCCATGACATTCGTGAGGCGGAAGCATATGCCATTGCGGTTGAGCTTTCGAATAAGAACCTTCTAACCTTAGTGAAAGAAGCACGTGCCGGGGGCATGTATAGCAGCTGCTTTGAGATTTCTGTGACTCAGCATGACACGCTGAGAGACCTTGCTCTTATATTGAGCAAGCGCGGGAGCATTCATGAACACAGAAGGTTGGTCATGGCACAACGAGAAGAAAATGGACTACTCCCAAGAGAATGGTCAAGATACCAGGACCAACCCTTTGAAGCTCAGATTGTTTCAATCAACACAGGGGAAATGACAGAAATGGATTGGTTTGAGCTGGATTTTCCCAAGGCTGAAGTGTTGATCATCAATTTCACGTCCAGTGATTACTTTTTACCTCCCTTCATCAGTAAGATGCCAAATTTGAGGGCACTGATAATAGTAAACTACAGTACCTCATATGCTCGCCTTCACAATGTTTCAGTTCTTAGGAATTTGACCAACTTGAGGAGTCTCTGGCTAGAAAAGGTTTCCACCCCTCAGTTGTCAGGCACTGTCTTGAAAAGCTTGAGCAAACTATTCGTAGTCCTCTGCCAGATTAACAACAGTTTGGATGGGAAACAGTTCCCTAACCTCTCTGAGCTCACACTTGATCACTGTAATGATCTAACATACTTGCCCTCAAGCATTTGTGGAATAAAGTCACTCAGAAACATGAGCCTCACAGACTGCCACAATTTGTCTGAACTACCTGATGAATTTGGCAATCTAAAATCTCTAGAGATCCTCCGTTTATATGCTTGTCCTGATCTAGAAACACTTCCTCCTAGCATGTGTGACATGAAGAAATTGAAGTACATTGACATTTCTCAATGTACTAACCTCACCTGCTTCCCTAAAGAGATTGGTAGATTAGTAAGTTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCAAAGTCTGCAGTGTCATTACACTCTCTGCAGCTTGTAATTTGTGATGAGGAGGTGTATGGTACATGGAGAGATGTTGCTGAGATGGCCAAGTCAAATGTTCATATTCAAGTACCAGAACAACACTTTGATCTTGACTGGCTTCAAGAATGA 2475 0.4768 MALTDLFTGEIASDLWKMLITISRKALRCKSSAEQLITYVREILPTIEEIKYSGVELPAPRQSQLDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADVHHARFEMAERFDRVEASNRRMERFLEEMKIGVNGGGWVEEAVKSMQEDETWVEGCNGNNGFGVGLDFGKKKVMEMVFSNNDADWIVGICGIGGSGKTTLARELCRDDQVRCYFKDRILFLTVSQSPNVEQLRARIWGHIMGNQGLNGNYVVPQWMPQFECKGEAQVLVVLDDVWSLSVLEQLVWKIPGCKFLVVSRFRFPTFFSATYHVELLGEEDALSLFCHHAFGQKSIPLGANVSLVKQVVAECGKLPLALKVIGASLRDQNEMFWLSVKSNLSQGHSIGESYEINLIDRMAISTNYLPEKIKECFLDLCSFPEDRKIPLEILINMWVEIHDIREAEAYAIAVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDTLRDLALILSKRGSIHEHRRLVMAQREENGLLPREWSRYQDQPFEAQIVSINTGEMTEMDWFELDFPKAEVLIINFTSSDYFLPPFISKMPNLRALIIVNYSTSYARLHNVSVLRNLTNLRSLWLEKVSTPQLSGTVLKSLSKLFVVLCQINNSLDGKQFPNLSELTLDHCNDLTYLPSSICGIKSLRNMSLTDCHNLSELPDEFGNLKSLEILRLYACPDLETLPPSMCDMKKLKYIDISQCTNLTCFPKEIGRLVSLEKIDMRECPMIRYLPKSAVSLHSLQLVICDEEVYGTWRDVAEMAKSNVHIQVPEQHFDLDWLQE* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1898 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Vra6g1898 824 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 821 - -
Vra6g1898 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 435 IPR027417 -
Vra6g1898 824 PRINTS Disease resistance protein signature 208 223 - -
Vra6g1898 824 PRINTS Disease resistance protein signature 283 297 - -
Vra6g1898 824 PRINTS Disease resistance protein signature 370 384 - -
Vra6g1898 824 PRINTS Disease resistance protein signature 731 747 - -
Vra6g1898 824 Pfam NB-ARC domain 193 414 IPR002182 GO:0043531
Vra6g1898 824 Gene3D - 334 413 IPR042197 -
Vra6g1898 824 Gene3D Ribonuclease Inhibitor 536 808 IPR032675 -
Vra6g1898 824 SUPERFAMILY RNI-like 568 786 - -
Vra6g1898 824 Gene3D - 179 322 IPR027417 -
Vra6g1898 824 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 821 IPR044974 GO:0006952
Vra6g1898 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Vra6g1898 824 Gene3D - 415 506 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1898 Vra-Chr6 35572611 35576298 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1898 6 35572611 35576298 Vra6g1898 6 35572611 35576298 ECH