Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra6g1894 | ATGAGAAGATTCAAACAATGTTCTTCTTCATTCTCTTCTCATTATTCTGCTTCTGAATCCAATCCTAGTAATAATCATAACAGCAACAATGGTGTTAGAGTAAGAGGGACGTGGAGTGCGGAAGAAGATAGGGTTCTCACTGGGCTTGTAGAGGCCCATGGGCCGAAAAACTGGGCCTTGATAAGCCTACACGTAAAGGGCCGTTCTGGGAAGTCTTGCAGGCTTCGGTGGTGCAACCAGCTGAGTCCCACGGTGGAGCACCGACCGTTCACCACGCGTGAGGACGCGATTATCTTGCACGCGCACGACCGGTTAGGGAACAAGTGGGCAGCCATTGCGAGAATGCTTCCGGGACGGACCGATAACGCCGTTAAGAACCACTGGAACGCCACGCTCAAGCGCAGGGTCTCCCAACGACGTCGTTTTGGGGATGACCCATTGACTGCGCTGACTCTGGCGCCGCCGGGAAGCGGCGGCCGAGGTTGGACGGCGGGGTTTCGCGATGTGGTTGCGAAGGAAGTCAGAGAATATGTGTCTTTCTCGTTTTCCGACAACTTGGGCTCTAACGAGAAATTATCCAAATACTAA | 588 | 0.5306 | MRRFKQCSSSFSSHYSASESNPSNNHNSNNGVRVRGTWSAEEDRVLTGLVEAHGPKNWALISLHVKGRSGKSCRLRWCNQLSPTVEHRPFTTREDAIILHAHDRLGNKWAAIARMLPGRTDNAVKNHWNATLKRRVSQRRRFGDDPLTALTLAPPGSGGRGWTAGFRDVVAKEVREYVSFSFSDNLGSNEKLSKY* | 196 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra6g1894 | 195 | PANTHER | TRANSCRIPTION FACTOR MYB44-LIKE | 1 | 140 | - | - | |
Vra6g1894 | 195 | CDD | SANT | 89 | 132 | IPR001005 | - | |
Vra6g1894 | 195 | Pfam | Myb-like DNA-binding domain | 89 | 129 | IPR001005 | - | |
Vra6g1894 | 195 | Pfam | Myb-like DNA-binding domain | 35 | 81 | IPR001005 | - | |
Vra6g1894 | 195 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Vra6g1894 | 195 | Gene3D | - | 88 | 145 | - | - | |
Vra6g1894 | 195 | SUPERFAMILY | Homeodomain-like | 34 | 128 | IPR009057 | - | |
Vra6g1894 | 195 | Gene3D | - | 34 | 86 | - | - | |
Vra6g1894 | 195 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 33 | 85 | IPR017930 | - | |
Vra6g1894 | 195 | ProSiteProfiles | Myb-like domain profile. | 35 | 81 | IPR001005 | - | |
Vra6g1894 | 195 | CDD | SANT | 37 | 79 | IPR001005 | - | |
Vra6g1894 | 195 | PANTHER | MYB PROTEIN-RELATED | 1 | 140 | - | - | |
Vra6g1894 | 195 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 87 | 136 | IPR017930 | - | |
Vra6g1894 | 195 | ProSiteProfiles | Myb-like domain profile. | 82 | 132 | IPR001005 | - | |
Vra6g1894 | 195 | SMART | sant | 86 | 134 | IPR001005 | - | |
Vra6g1894 | 195 | SMART | sant | 34 | 83 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra6g1894 | Vra-Chr6 | 35544445 | 35545397 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Vra6g1894 | Myb_DNA-binding | 3.6e-14 | CL0123 |