Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1891 ATGAGAAAGTGGATGATGCAGGGAAGCTCGAGAATTGCAAATAAAATTGGAAAAGCCTCAAGCAGAGAAAGAAAATTGGCTTTGAAACAAGATGTGGATAGGTTGAAGAAGAAGCTTAGGCATGAAGAGAATATTCATAGAGCATTGGAGAGGGCTTTCAACAGGCCATTGGGAGCTTTACCTCGTCTTCCTCCATATCTTCCTCCATACATACTAGCTCTTCTGGCTGAAGTGGCGGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGAAGATTGTGCATTTCAGGCAGGATTTGTATCAGGAAGCTGTTTACATGTCATATTCTATGAGGAAACTTGAACATTCAGTTTCAGCTCCTCCAAACAAGTCAAACTCAACAATGGACAGTCCCAAGTTGGAAAAATTGAAGTTTCAATCACAAACAGTTGGTAATTCTGCAGCATCATCTGCAACTATGCCTACCACAACTCTCACAGAGGATAAGGAGAATCAATCCTGTAGTAATTCTTCCAAGAGCAGGAATCAATCATCCAACCATATGAACAAATATCCAATTAGAAAACTTCACAATAAATCCCCACAGAAAAGGTTGGATCATCCAAAAATAAAGCAAGAACCAAGGTTGAACAGCCAGCAAATTGGAGATTTGAGAAACCATAGTACACATAAAAGTTCACCAGAAGCTGAGAGACCAAATATAATTTCAGAAAATATTGTGAAGTGCTTATCAAGCATTCTCTTGAGAATGAGTGCTGTGAAGAATCCAGGTTCTGCATGTGACATTCCACACCTGTGTGATCTAAGACCTAAAAACTGTGATGAAGGAACAGAGTTTGTGGATCCGTATGGCATCTGTTTGGAATTTGGGAAGAGGGATATCGGTCCATACAAGCAATTATGTGAAATTGATGCTAAATCTTTCAATCCAAAACGAACTGCAAATACTTTGTTTTTACAGCATCGTTTGAAACTTCTTTTCAGGAAACTAGAATCTGTCAACCTAGAAAACCTCAACCATCAGGAGAAGCTCGCATTCTGGATAAACATCTACAACTCCTGTATGATGAATGCATTTATAGAAAATGGCATACCAGAAAGTCCTGAAATGGCTGTTGCACTGATGAGGAAGGCAACAATAAATGTGGGTGGACATGTGCTAAGTGCAACAACCATAGAGCACTTCATTCTTAGACTTCCTTATCATTGGAGATTTACATTTTCCAAGGGAACAAAAAATCATGAAATGACAGTAAGAAGCGTGTATGGACTGGAACTGTCAGAACCCCTTGTTACATTTGCTCTCTCCTGTGGAACCTGGTCCTCTCCTGCTGTGAGAGTTTACACTGCATCTCAGGTTGAGAATGAGCTGGAAGTGGCCAAAAGAGAGTTCTTACATGCAGCAATTGGATTTTCAACTTCAAAGTTTGCTCTCCCTAAGCTGCTGGATTGGTATTTACTGAACTTTGCAAAAGACTTGGAATCATTGCTGGACTGGATCTGCCTCCAGTTACCAAGTGAACTTGGGAAACAAGCCATAAAACTGCTAGAGGAAAGAAAAACTGAGCCCCTGTCACAGTTTGTACAAATAATGCCATACGAGTTCAGCTTTAGATACTTGATATGCACATAA 1632 0.4007 MRKWMMQGSSRIANKIGKASSRERKLALKQDVDRLKKKLRHEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVRLEEKIVHFRQDLYQEAVYMSYSMRKLEHSVSAPPNKSNSTMDSPKLEKLKFQSQTVGNSAASSATMPTTTLTEDKENQSCSNSSKSRNQSSNHMNKYPIRKLHNKSPQKRLDHPKIKQEPRLNSQQIGDLRNHSTHKSSPEAERPNIISENIVKCLSSILLRMSAVKNPGSACDIPHLCDLRPKNCDEGTEFVDPYGICLEFGKRDIGPYKQLCEIDAKSFNPKRTANTLFLQHRLKLLFRKLESVNLENLNHQEKLAFWINIYNSCMMNAFIENGIPESPEMAVALMRKATINVGGHVLSATTIEHFILRLPYHWRFTFSKGTKNHEMTVRSVYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEVAKREFLHAAIGFSTSKFALPKLLDWYLLNFAKDLESLLDWICLQLPSELGKQAIKLLEERKTEPLSQFVQIMPYEFSFRYLICT* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1891 543 Pfam Protein of unknown function, DUF547 336 465 IPR006869 -
Vra6g1891 543 MobiDBLite consensus disorder prediction 139 184 - -
Vra6g1891 543 PANTHER TRANSCRIPTION FACTOR 7 542 - -
Vra6g1891 543 PANTHER EXPRESSED PROTEIN 7 542 - -
Vra6g1891 543 MobiDBLite consensus disorder prediction 139 231 - -
Vra6g1891 543 Pfam Leucine-zipper of ternary complex factor MIP1 21 102 IPR025757 -
Vra6g1891 543 Coils Coil 18 52 - -
Vra6g1891 543 Coils Coil 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1891 Vra-Chr6 35520763 35524920 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1891 6 35520763 35524920 Vra6g1891 6 35520763 35524920 ECH
Vra6g1891 6 35520763 35524920 Vra5g1531 5 21947585 21951452 PCT