Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1881 ATGGAAGCAACTCAAAAAAGTGACGATGGACACCTGATTACTGTGCTGAGTATCGATGGTGGTGGCATTCGGGGAATCATTCCAGGAGTTTTACTTGCTTTCCTTGAATCAGAACTTCAGAAGCTGGATGGTGCTGATGCAAGACTAGCAGATTACTTTGATGTGATCGCAGGAACAAGCACCGGTGGATTAGTCACTGCAATGCTCACTGCTCCAAATAAAGATAACCGACCCTTGTATGCAGCCCAAGATATTAAGAAGTTCTACCTTAAGCATTCCCCAAATATCTTCCCACAGAATAGTCCCTGGAATATATTCTCAACGGCGATGAAGTTCGGAAGAACTCTGACAGGACCACAGTACGACGGCAAGTATTTACACAAGCTCATCAGGGAAGAACTAGGGGACATAAAATTGGAACAAACATTAACCAATGTCGTTATCCCAGCATTTGACATCAAACACCTTCAACCCACCATCTTTTCCAGCTTCCAGGTGAAGAAGAGGCCAGATTTGAATGGGTTGTTGTCTGATATATGCATTTCAACTTCAGCAGCACCAACCTACCTTCCAGCTCATTCCTTTGAAACCACAACCCCCGATGGTCCTTTCAAATTCGACCTTATAGATGGTGGTGTAGCAGCAAATAACCCGGCACTGGTGGCGATGGCAGAATTGTCGAACAAAATCCACAGTGAAGGTTCATATGAAAACTTCAATGTGAAACCGATGCAATACAGTAAGTTTTTGGTGATATCATTGGGAACAGGTTCTGCGAAACAAGATATGAAATACAGTGCTTCTGAGGCATCTTCATGGGGCGCGTTGAGCTGGGTTTCCAACGCCAAAGGCACTCCTATAATCGATGTCTTCACTGAAGCTAGTTCTGACATGGTTGATTTCCACATCTACTCCGTTTTTCAAGCACGCAATGCTGAAGAAAACTACCTCCGAATTCAGGAAGATACTTTAACTGGGGAATTGACTTCGGTTGACATTGCCACGGAGAAGAATTTGAATGGCCTCGTCCAAGTTGGGGAAGCATTGTTAAAGAAACCAGTTTCAAAGATTAACTTGAGGACTGGTGTTCATGAAACTGTTGATTCTAACGAAACAAATGCAGATGCCTTGAAGAGGTTTGCGGAACGACTATCCAAACAAAGGAGATTTCGTAAATCTCTAATATCTAAGTACAATGGGAAATTTTCAAATATGAAGGGATGA 1224 0.4297 MEATQKSDDGHLITVLSIDGGGIRGIIPGVLLAFLESELQKLDGADARLADYFDVIAGTSTGGLVTAMLTAPNKDNRPLYAAQDIKKFYLKHSPNIFPQNSPWNIFSTAMKFGRTLTGPQYDGKYLHKLIREELGDIKLEQTLTNVVIPAFDIKHLQPTIFSSFQVKKRPDLNGLLSDICISTSAAPTYLPAHSFETTTPDGPFKFDLIDGGVAANNPALVAMAELSNKIHSEGSYENFNVKPMQYSKFLVISLGTGSAKQDMKYSASEASSWGALSWVSNAKGTPIIDVFTEASSDMVDFHIYSVFQARNAEENYLRIQEDTLTGELTSVDIATEKNLNGLVQVGEALLKKPVSKINLRTGVHETVDSNETNADALKRFAERLSKQRRFRKSLISKYNGKFSNMKG* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1881 407 Gene3D Cytosolic phospholipase A2 catalytic domain 2 396 - -
Vra6g1881 407 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 16 223 IPR002641 GO:0006629
Vra6g1881 407 PANTHER XYLOSE ISOMERASE 4 394 - -
Vra6g1881 407 SUPERFAMILY FabD/lysophospholipase-like 13 376 IPR016035 -
Vra6g1881 407 PANTHER PATATIN 4 394 - -
Vra6g1881 407 Pfam Patatin-like phospholipase 16 223 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1881 Vra-Chr6 35426741 35429030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1881 10 391 Miscellaneous Gene Families AT2G26560 61.198 1.10e-165 469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1881 6 35426741 35429030 Vra6g1881 6 35426741 35429030 ECH