Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1876 ATGGTGAAAGAAATAGCCACAAAACATGATTGTTCTCCATGTAGTTATCTATCTTTGTTTCTCTCCCTCGATCACTCACTCACTCCAATGGAAAACAGCGACACTAACACACCGACCACCGCAGAGGCAGAAGTAGCACACGATTTCCCCGGTCTCATCCGTGTCTTCACTGACGGTCGCATCCAACGTTTCAAAGGAACCGACGTCGTTCCACCCTCCACCCCCACCACTCACCCCGTCTCCTCCAAAGACGTCAATCTCAACCCTCATTCCACTCTCTCCGCTCGCCTCTTCCTCCCGACACTTCCATCCATCAACACCAACCACCGCCGCAGCCTCCCTCTCTTGGTCTACTTCCACGGCGGTGGCTTCTGCACCTCCTCCCCCTTCACGTCAACCTACCACCACTACATCGCAGCTGTCGCTGCCGAAGCCAAGCTCGTCGCAGTCTCTGTCCAGTACAGGCTGGCCCCGGAGCACCCCATTCCAGCAGCGTACGAAGATTCATGGGCTGCACTGCAATGGGTCGCGTCACATCGCAGTAACGCTGGACCAGAGCCTTGGTTGAATGAAAATGTAGACTTCGGAAGAGTGTTCTTGGCCGGGGACAGTGCTGGTGCCAACATAGTGCATAACTTAACTATGTTACTTGGGGACCCGGATTGGGACATTGGCATCGACATCCTAGGAGTTTGTCTCGTCCACCCGTATTTCTGGGGATCAGTTCCTTTGGGATCCGAGACCATGGATTTGGATAGGAAAGCTTTTGTGAACCGACTGTGGCCCTTTGTGTGTCCGGAGTCGCCGGACAATGATGACCCACGGATTAACCCGGTGGGGGAGGGATCACCGAGCTTGGCGTGGCTAGGGTGCAGGAGGGTGCTGATTTGTGTGGCGGAGAAGGATGTGCTGAAGGAGAGAGGGTGGATTTACTACAATGCTTTGAGTAGAAGTGGGTGGATGGGGGTGGTGGAAATTAAGGAGACTCAAGGGGAGGGTCATGCCTTTCATCTTTATGACTTGGCTTGTGACAAGGCTCAGGATTTGATCAAAAGCTTGGCTCGTTTCTTCAACAGAGATCAGCCTCCTTCAATTTAA 1098 0.5328 MVKEIATKHDCSPCSYLSLFLSLDHSLTPMENSDTNTPTTAEAEVAHDFPGLIRVFTDGRIQRFKGTDVVPPSTPTTHPVSSKDVNLNPHSTLSARLFLPTLPSINTNHRRSLPLLVYFHGGGFCTSSPFTSTYHHYIAAVAAEAKLVAVSVQYRLAPEHPIPAAYEDSWAALQWVASHRSNAGPEPWLNENVDFGRVFLAGDSAGANIVHNLTMLLGDPDWDIGIDILGVCLVHPYFWGSVPLGSETMDLDRKAFVNRLWPFVCPESPDNDDPRINPVGEGSPSLAWLGCRRVLICVAEKDVLKERGWIYYNALSRSGWMGVVEIKETQGEGHAFHLYDLACDKAQDLIKSLARFFNRDQPPSI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1876 365 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 198 210 IPR033140 -
Vra6g1876 365 Gene3D alpha/beta hydrolase 55 361 IPR029058 -
Vra6g1876 365 SUPERFAMILY alpha/beta-Hydrolases 39 359 IPR029058 -
Vra6g1876 365 Pfam alpha/beta hydrolase fold 116 337 IPR013094 GO:0016787
Vra6g1876 365 MobiDBLite consensus disorder prediction 67 86 - -
Vra6g1876 365 PANTHER ARYLACETAMIDE DEACETYLASE 42 358 - -
Vra6g1876 365 PANTHER CARBOXYLESTERASE 2-RELATED 42 358 - -
Vra6g1876 365 MobiDBLite consensus disorder prediction 69 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1876 Vra-Chr6 35386919 35388016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1876 42 361 Carbohydrate Esterase AT3G48700 45.122 2.55e-95 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1876 6 35386919 35388016 Vra5g1525 5 21888803 21889971 PCT