Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1869 ATGCAAGCAGTGGGGAGGCTTGGCAGCTACATCAGCCGCGGCGTGTATACCGTTTCAGGGCCGTTTCTTCCATTTGGTGGGGCGGTGGACATTGTTGTGGTTCAGCAGAAAGATGGGAGCTTCAAATCCTCTCCTTGGTATGTTAGGTTTGGGAAATTCCACATGGATTGGAAGGAGAAGGAGAAGGTGAAGGTTCGTGTCAGTGTCAACGGTGTAGAGCCTGATTTCCATTTGTATTTGAACCTCAAAGGGGAAGTTGTTTTCCGCCATGGAATCACACAAGAAGAACAAGAAGGGGAATCAATAGTAGAGGGTGAAAGTGAAAGTACGAGTGACAGTAATTGTATCATGCCACAGGGTGGTAATAGGCATTTCAAGTCCATAAGTTGGAACTTTGATTCTGTGGACAATTCAAATGCACAGGCCAAGGCTGTTGGTAGAACCAGGTCTCGCCGCTCCCGAATTCTTGGGCTTGTGTCAAGATCTTTGAGGGGAGGAGAGCGTGAAGATGGTGATGTGGATGGGTTGGATTCCGTGGAGCGTGCTGAGATTGCAGCCAACTTGTTGGAGCTAAAGTGGTCCACCAATCTCAGTTTTGATGATCGACTGCCTCGTAAAGACAGGAAAAAGACTAGGGTTGATGCCTTGAACAATGGTTTACCTTTACCATCATGTAACATGAAGGAGGAATCTTATTCTTGCAGTGAGCAAGATGATACCAGATCAAAGCCTGTGTCCAATGAGGTGTGCCTTGCAAGTGCAGGATGTGGAGAAGTTCGTGTCACTGCTGAGGAGGTCTTGCAACCTGCAACTCTAGTTCTACCTGAGGTTAAAGAAAGTGACGAAGTCACTAAGGATTTTGAGATTGGTAGAACACCAATGGAGGCCTCTGTGTTACAGTCTCAGCAAAGAGAATGTTCCCATTCTGGTATGTGTGCTGCCGGCGATGTTGGAGACAAACCAAAGTTTCGAAAATCTCATACTGTCAATATTGGTCGAAGAGATTGCTCGATTAAAAATGTTAGAGAGAATACTCCAACCTCTGAACAACTTGAATCCTTGAATCTGAAGGAAGGGAGGAACACAATAACTTTCAGTTTCTCCACAGCTATGGGGAACCACCAAGTTGATGCTCAAATATATTTGTGGAAATGGAATACTCGTATAGTGATATCAGATGTAGATGGGACAATTACAAGGAAAATGGCTACCAGCTACTTTTTCTCAGTGCTCGTGCAATATCCCAGGCCTATCACACCAGACAATTTCTTTGCAACCTTAAGCAGAATGGGAAAGTTTTACCAGATGGTCCTGTTGTTATTTCCCCTGATGGACTTTTTCCTTCTCTATATCGAGAAGGACATTAAGGCACTTTTTCCTCCAGATTGCAATCCATTCTATGCTGGTTTTGGAAATAGGGATACTGATGAAGTCAGCTACCTTAAGGTTGGAATCCCAAAAGGAAAAGTTTTCATCATTAATCCAAGGTTTTTTCAGGGAGAGATTGTTGTAAATAGTCGTTGTTTTGACACACATTCATACACCTCTCTTCATTCTCTTGTGAATGGAATGTTTCCCCCTACAAACTCATCTGAACAGGAAGATTTTAATTCATGGAATTACTGGAAATTACCTGAGACCTCTTCTGCTATAAATTAA 1659 0.4346 MQAVGRLGSYISRGVYTVSGPFLPFGGAVDIVVVQQKDGSFKSSPWYVRFGKFHMDWKEKEKVKVRVSVNGVEPDFHLYLNLKGEVVFRHGITQEEQEGESIVEGESESTSDSNCIMPQGGNRHFKSISWNFDSVDNSNAQAKAVGRTRSRRSRILGLVSRSLRGGEREDGDVDGLDSVERAEIAANLLELKWSTNLSFDDRLPRKDRKKTRVDALNNGLPLPSCNMKEESYSCSEQDDTRSKPVSNEVCLASAGCGEVRVTAEEVLQPATLVLPEVKESDEVTKDFEIGRTPMEASVLQSQQRECSHSGMCAAGDVGDKPKFRKSHTVNIGRRDCSIKNVRENTPTSEQLESLNLKEGRNTITFSFSTAMGNHQVDAQIYLWKWNTRIVISDVDGTITRKMATSYFFSVLVQYPRPITPDNFFATLSRMGKFYQMVLLLFPLMDFFLLYIEKDIKALFPPDCNPFYAGFGNRDTDEVSYLKVGIPKGKVFIINPRFFQGEIVVNSRCFDTHSYTSLHSLVNGMFPPTNSSEQEDFNSWNYWKLPETSSAIN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1869 552 SMART lns2 389 505 IPR031315 -
Vra6g1869 552 Pfam lipin, N-terminal conserved region 1 98 IPR007651 -
Vra6g1869 552 PANTHER LIPIN 453 546 IPR026058 -
Vra6g1869 552 PANTHER LIPIN 1 246 IPR026058 -
Vra6g1869 552 PANTHER LIPIN 325 400 IPR026058 -
Vra6g1869 552 PANTHER GH19076P 453 546 - -
Vra6g1869 552 PANTHER GH19076P 325 400 - -
Vra6g1869 552 PANTHER GH19076P 1 246 - -
Vra6g1869 552 Pfam LNS2 (Lipin/Ned1/Smp2) 345 412 IPR013209 -
Vra6g1869 552 Pfam LNS2 (Lipin/Ned1/Smp2) 451 526 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1869 Vra-Chr6 35332970 35338521 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1869 6 35332970 35338521 Vra6g1869 6 35332970 35338521 ECH
Vra6g1869 6 35332970 35338521 Vra5g1517 5 21828635 21836630 PCT