Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1866 ATGGAAGTTTCAAGTCTTCAAAAGTTGTTCAAGACAGCACCTTCTAAAGCATTGGTCATCAGAATCAATTTGGTCTGTCTTGCCATCTTTCTTGTTGTTTATGCAACGCTTCTTCTCCAACCATCTTCCTCAGTCTACTTTGAAAATGCAGCCTCCCTTGTTAGGTGCTCCTTGAGGGAATGCCATCACAAGGAAGAAAAAAGCATGAAGATGAAAGCAGTGTTGGAGGAACCAGAATTGAAAAGTAGAATGCGAAAGCAGAATGCGAGTAAAATAGAGGTGCCTAGGTTCTTTGGTGAAATGGGGAAGGGATTGAAGATGGGAATGGTGAACATGCATGAAGATGATGTGAGTGAATGGAACAACCTTGGAGAAACAACAGAGGTTTATTTCGAAAGGGTGTCAGAGTTTTTCAATTGGACAGATTTATTTCCGGAATGGATAGATGAAGAGGAAGAGAGTGATGTTCCATCATGCCCGGAGATACCAATGCCAGAGTTTGCAGCATATGGAAACATGGACGTGATCATAGCCAAGTTGCCATGCAAGTACCCTGAAGAAGGGTGGGCAAGGGATGTTTTCAGGTTACAAGTTCATATGATTGTGGCGAATTTGGTGGTGAAGAAAGGGAAGAAGGATTGGAATTGGAAGACAAAAGTGGTGTTGTGGAGCAAGTGTAGGCCAATGATGGAGGTGTTTAGGTGCAAGGATTTGGTTAAGCAGGAAAATGAATGGTGGTATTATGAGGTTGATGTAAAGTGGTTGGAGCAGAAGGTGTCTTTGCCTGTTGGCTCTTGCAATTTGGCTCTGCCTCTGTGGGAACAAGGAATTGACAAGGTGTACGACACGTCAAAACTGGAACAGAACGTTCAAAGCGAAGCTCGAGCGAAACGCGAGGCCTACGCGACGGTTCTTCACTCGTCGGAAGGCTACGTTTGCGGCGCAATAACGCTGGCGCAGACGCTTCTCCAGACGGGAACCAAACGCGACCTCGTGCTACTCCTCGACAACTCCATCTCCGCCGTCAAGCGCCGCGCCCTCGAGCTCTCCGGCTGGAAGATCCGACTCATCTCCCGGATCCGGAACCCGCGGGCCGAGGAGGGCACCTACAATGAGTACAACTACAGCAAGTTCAGGTTGTGGCAGTTGACGGAGTACGAGAGAGTGATCTTCATCGACGCCGACATCATTGTCCTCCGCAACCTCGACATCCTCTTCAATTTCCCTCAGATGTCCGCCACCGGTAATGACCAGTCCATCTTCAACTCCGGCATCATGGTTCTCGAACCTTCCAACTGCACCTTCGATGTTCTCATGTCGCGCCGCCACGATGTCGTCTCGTACAACGGGGGCGACCAGGGTTTCCTGAACGAGATATTCGTGTGGTGGCACAGGCTTCCCCGGCGCGTGAACTTTCTGAAGAACTTCTGGGCGAACACGACGCTGGAGGCGAGTGTGAAGAACGCGATGTTCGGCGCGGACCCTCCGAAACTCTACGCGATCCACTACCTGGGTCTGAAGCCCTGGCACTGTTACAGGGACTACGACTGCAACTGGGACGTGGAAGATCAAAGGGTCTACGCCAGCGACGTGGCGCATCGACGGTGGTGGAAAGTTCACGACGCCATGGACGAGCGGCTGCAGAGCCTCTGCCGGTTGACCCGAAAGAGAAGGACGGAGCTCAACTGGGAGAGGCGAAAGGCAGGGAAGCTTGGGTTGCCGGACATGCACTGGAAGATCAATGTCACAGATCCCAGAAGACAAGGCTCACTTTTGATTGATTAG 1785 0.5081 MEVSSLQKLFKTAPSKALVIRINLVCLAIFLVVYATLLLQPSSSVYFENAASLVRCSLRECHHKEEKSMKMKAVLEEPELKSRMRKQNASKIEVPRFFGEMGKGLKMGMVNMHEDDVSEWNNLGETTEVYFERVSEFFNWTDLFPEWIDEEEESDVPSCPEIPMPEFAAYGNMDVIIAKLPCKYPEEGWARDVFRLQVHMIVANLVVKKGKKDWNWKTKVVLWSKCRPMMEVFRCKDLVKQENEWWYYEVDVKWLEQKVSLPVGSCNLALPLWEQGIDKVYDTSKLEQNVQSEARAKREAYATVLHSSEGYVCGAITLAQTLLQTGTKRDLVLLLDNSISAVKRRALELSGWKIRLISRIRNPRAEEGTYNEYNYSKFRLWQLTEYERVIFIDADIIVLRNLDILFNFPQMSATGNDQSIFNSGIMVLEPSNCTFDVLMSRRHDVVSYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASVKNAMFGADPPKLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKVHDAMDERLQSLCRLTRKRRTELNWERRKAGKLGLPDMHWKINVTDPRRQGSLLID* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1866 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 297 546 IPR029044 -
Vra6g1866 594 Pfam Glycosyl transferase family 8 367 510 IPR002495 GO:0016757
Vra6g1866 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 588 - -
Vra6g1866 594 CDD GT8_Glycogenin 299 543 - -
Vra6g1866 594 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 588 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Vra6g1866 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 547 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1866 Vra-Chr6 35285848 35289921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1866 71 593 Glycosyltransferase AT4G33330 66.415 0.0 741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1866 6 35285848 35289921 Vra6g1866 6 35285848 35289921 ECH
Vra6g1866 6 35285848 35289921 Vra5g1515 5 21813382 21818689 PCT