Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1863 ATGGATGCAATTTTCGCTTACATCATTGTCATTTTGCTTACCTTATTTTCATTCATGTTCTTACCAAAACTAAACAGAAGAAAACCTCAGAACCAAACAACCGCAAAGCTCCCTCCAGGTTCAATGGGATGGCCGTACATAGGAGAAACCCTCCAACTCTACTCCCAAGACCCAAATGTCTACTTTTCCACCAAACACAAAAGGTTTGGTGAAATATTTAAGACCAACATCCTGGGTTGTCCCTGTGTGATGCTGATCAGCCCTGAGGCTGCACGCTTTGTGCTAGTGACTCAAGCTCACTTGTTCAAACCAACGTACCCGAAAAGCAAAGAGCGTTTGATTGGTCCTTTTGCTTTGTTTTTCCATCAGGGAGACTACCACACTCGTCTGAGGAAGCTTGTTCAGAGGTCACTTTCTTTTGAAGCACTTCGCAACTTGGTGCCCCATATTGAAGCCTTAGTGTTATCTGGCATGAACTCTTGGGGTGATGGCCAAATCATTAACATGTTTAAGGAAATGAAAAGGATTTCTTTTGAAGTTGGAATCCTCACAACCTTTGGCCATCTAGAGCCACGTTCGAGGGAGGAGCTAAAGAAGAATTACCGTATTGTGGATGCTGGTTACAATTCCTTCCCAACTTGCATTCCAGGAACACAGTACAAAAAAGCACTGCTGGCTAGAAAGAGACTCGGGAAGATTATAAGTGAGATTATCTGTGAGAGGAAGGAGAAGAAGTTGGTCGACAGGGATCTTTTGAGTTGTCTGTTGAATTGGAAAGGTGAAGGAGGAGAAGTGTTATCTGATGACCAAATTGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCAGGACACCACAGCTAGTGCCATGACATGGGTTGTAAAGTACCTGCATGATGAACCGAAACTTCTGGAGTCAGTAAAGGCAGAGCAGAAGGCTATTCAAAAGTCTAATGAAGGTAATCTACCACTGAGTTGGGATCAGACTAGAAACATGAGAATTACTCACAAGGTTGTGTTAGAGAGTTTGAGAATGGCAAGCATTATTTCATTCCCTTTCAGAGAGGCAATAGCTGATGTGGAGTACAAGGGATTCTTAATACCAAAAGGGTGGAAAGCCATGCCTCTATTCAGAAATATTCACCACAATCCTGAGTTTTTTCCAGAGCCTCAGAAATTCAACCCTTCAAGGTTTGAGGTGGCACCAAAGCCCAATACTTTCATGCCATTTGGTAGTGGAGTGCATGCCTGCCCTGGCAATGAGCTTGCTAAGCTGGAGACACTGATTATGATCCATCATTTGGTCACCAAATTTAGGTGGGAAGTGGTAGGATCCAAGGGTGGAATTCAGTATGGTCCATTCCCCTTGCCACTGAATGGACTCCCAGCTAGATGTTGGAGAGAATCTACCAGCTAG 1416 0.4379 MDAIFAYIIVILLTLFSFMFLPKLNRRKPQNQTTAKLPPGSMGWPYIGETLQLYSQDPNVYFSTKHKRFGEIFKTNILGCPCVMLISPEAARFVLVTQAHLFKPTYPKSKERLIGPFALFFHQGDYHTRLRKLVQRSLSFEALRNLVPHIEALVLSGMNSWGDGQIINMFKEMKRISFEVGILTTFGHLEPRSREELKKNYRIVDAGYNSFPTCIPGTQYKKALLARKRLGKIISEIICERKEKKLVDRDLLSCLLNWKGEGGEVLSDDQIADNIIGVLFAAQDTTASAMTWVVKYLHDEPKLLESVKAEQKAIQKSNEGNLPLSWDQTRNMRITHKVVLESLRMASIISFPFREAIADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRWEVVGSKGGIQYGPFPLPLNGLPARCWRESTS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1863 471 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 9 466 - -
Vra6g1863 471 Gene3D Cytochrome P450 26 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 Pfam Cytochrome P450 38 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 SUPERFAMILY Cytochrome P450 34 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1863 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Vra6g1863 471 PANTHER CYTOCHROME P450 26 9 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1863 Vra-Chr6 35264203 35269152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1863 7 469 Cytochrome P450 AT3G19270 66.164 0.0 649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1863 6 35264203 35269152 Vra6g1863 6 35264203 35269152 ECH