Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1858 ATGATCATCGCGGATTCCGATTACGAAGGTCCCGCAATCGAAGCCCTTGGTTCTCTCTTCAAGGTCACGCAAGTCTTTCTCCGGGACCATGGCATTCAGGTTTCTTACTCAGTTGAACATCTGAAATTGGCTGATAATCACGGTTCTGACCCTGTTCCTGAAGAATCTACTGGCATTGTTACTCCCGAGGATTTGGAGCTTAACCAACAACTGAATGAATTGGGGCTTCCTCTTTCCTTCCAGTCAAAGAAGGAGAAAAAAGGACCATTAAAAGGAAAAAAAAAGGGTAAACGTTCGAAGCATCCTGATACTTGTCACAACCCTGCAGATAAAACCCTATATGAAACGAGTGCGGAGGAGATTGTGTCTTCTGCAAAATTTCATGAAAAAACTAGTATTCCTTTATCTCCTATATCAATGCTGGGCCAGAGTGAATCTTCTTATTGCGAGGGTGCCATGGATATTGATATGACGCAGTATGCCTCTTGTGAAGTAGATAATTCAGCCTGCTCTACGGGGTTTGCTAGTGGTGTGTCCAGGGAGATAAATGATGATAATATAAATCAGGTAGCGGCTAATGATGCTCAGGACGGTGACTTTTTAATCAGTAATGATTATGTTGATTTGAAAACTACACCTTTTTCAGATTCTGCTGTCTCTGCTGAAAGCCATTTGACAGGTGCTGGTGTCAATTATTGTGGGGCAGAATATGATGAGTGTTTGATGGACAGTGAATGTTTAAAAGTTTCACCGACTGTTGGAAAAAGTACAGATTGTGAGACTATTTGCAATCACGACAGTGATGCCACTTGTCTTCCACATGTTATTGAATCCGAGTTGCTTCCTGTGAGCTCAGAAGGTATTGGATGCGACAGAAATGATGTTTCAAATAATTATGCCGAGCTCGGAGATTGGATGGCCTTCTGGGATACTTATTATAAGAGAACGTACTTCTACAATATCAGCACACGCACTTCTACATGGGACACACCGTCAGGGATGGAACATCTGGTAATTGGTGGATGTACTGAATCAGATGACAGTGAAACTCTTAAGTCTTCAGAAGGGTGTGGAATACAAAATTTCACTAAAGCACCTGAGGAAACCTTGATTGAAGAGAACATGGAAGGAAAGCAACATGAAGAGTGCCTTGCTGAGATTGGAGTTGCTGCTGACAATTTGGTCTCTGATATCACTACAAATAGTGAAAACCAATCTCTTGATCATTCAGACGAGTGTCTTGATATATGTAGTGGCAATTGTGGAATTTCATGCTGCTCAGTATCAAGTATGCCAGATCATATTATTTGCTCTAATGATAGACGCATTCAAGTAGCACCAGAGGTTAGTCATACACCCTTGGAAAACATGGCAATTGATATGTCTGGATTGGAATCTAAATTTGAACCTTCCATGTTAAAATGTGGGAAGAAAGTAAGAAGGCAAAGGCAGAGGAAATCATGTAATGAAGCTAAAGAATTGTGCCAACACTTCATTCGTGATCTGCACTTTCAAGAAATGCCTGAATCATATTCTGCTACAATTACCAAATATTGGTGTCAGAGGTATACTTTGTTCTCTAGATTTGATGATGGTATAAAGATGGATGAGGAAGGATGGTTTTCTGTCACTCCAGAGGCTATTGCTCAGCATCAAGCAATACGTTGTGCTAGTGACATGATAATTGACTGCTTCACTGGTGTTGGTGGGAACTCTATCCAATTTGCACGACGGCATAATGCTGCTATTTATGGGGTGGTTGATCAAATTGACTTTATAGTTGGTGATTTCTTCCTCTTGGCACCAAAGTTAAAGGCTGATACCGTTTTCTTATCTCCACCATGGGGGGGACCTGATTATCTCAAGGCTACGACTTATGACATGAAGACAATGCTTAGACCTCATGATGGTCATACACTGTTTAGTGCTGCAAAGGAGATTGCTTCCAGAATCGTCATGTTCCTTCCAAGAAATATCAATTTCAACCAATTGGCAGAGTTATCTCTGTCATCCAGTCCACCATGGTCACTAGAGGTGGAGAAAGTTTATTTAAATAATAAATTGAAGGCCATCACAGCTTATTTCAGTGATACAACAGTAGGAGGGTGCTAA 2112 0.4105 MIIADSDYEGPAIEALGSLFKVTQVFLRDHGIQVSYSVEHLKLADNHGSDPVPEESTGIVTPEDLELNQQLNELGLPLSFQSKKEKKGPLKGKKKGKRSKHPDTCHNPADKTLYETSAEEIVSSAKFHEKTSIPLSPISMLGQSESSYCEGAMDIDMTQYASCEVDNSACSTGFASGVSREINDDNINQVAANDAQDGDFLISNDYVDLKTTPFSDSAVSAESHLTGAGVNYCGAEYDECLMDSECLKVSPTVGKSTDCETICNHDSDATCLPHVIESELLPVSSEGIGCDRNDVSNNYAELGDWMAFWDTYYKRTYFYNISTRTSTWDTPSGMEHLVIGGCTESDDSETLKSSEGCGIQNFTKAPEETLIEENMEGKQHEECLAEIGVAADNLVSDITTNSENQSLDHSDECLDICSGNCGISCCSVSSMPDHIICSNDRRIQVAPEVSHTPLENMAIDMSGLESKFEPSMLKCGKKVRRQRQRKSCNEAKELCQHFIRDLHFQEMPESYSATITKYWCQRYTLFSRFDDGIKMDEEGWFSVTPEAIAQHQAIRCASDMIIDCFTGVGGNSIQFARRHNAAIYGVVDQIDFIVGDFFLLAPKLKADTVFLSPPWGGPDYLKATTYDMKTMLRPHDGHTLFSAAKEIASRIVMFLPRNINFNQLAELSLSSSPPWSLEVEKVYLNNKLKAITAYFSDTTVGGC* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1858 703 ProSiteProfiles WW/rsp5/WWP domain profile. 305 333 IPR001202 GO:0005515
Vra6g1858 703 CDD AdoMet_MTases 561 614 - -
Vra6g1858 703 CDD WW 303 331 IPR001202 GO:0005515
Vra6g1858 703 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 355 698 - -
Vra6g1858 703 Pfam RNA cap guanine-N2 methyltransferase 578 696 IPR019012 GO:0001510|GO:0008168|GO:0009452
Vra6g1858 703 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 507 661 IPR029063 -
Vra6g1858 703 Gene3D Vaccinia Virus protein VP39 509 700 IPR029063 -
Vra6g1858 703 SMART ww_5 300 333 IPR001202 GO:0005515
Vra6g1858 703 MobiDBLite consensus disorder prediction 87 101 - -
Vra6g1858 703 Gene3D - 293 339 - -
Vra6g1858 703 MobiDBLite consensus disorder prediction 82 111 - -
Vra6g1858 703 ProSitePatterns WW/rsp5/WWP domain signature. 305 331 IPR001202 GO:0005515
Vra6g1858 703 SUPERFAMILY WW domain 302 332 IPR036020 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1858 6 35198812 35206334 Vra6g1858 6 35198812 35206334 ECH